Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g01174 ATGGCGCGGGGTTATCCTCCCCACCCATCGAAGCCCGGTCTCCCCGCGACGGAGGACGACGGTGATCCGACCCGTTTAGCCTCTGTGGCGTTAGGAGCTTCCGTGGGCGGTGGACTCCGGAAGAAGGGAATTGGGGTTAGGGCGTGGCTGCTTTTGGACTCTACCGGTGTTGCGCAGGTCGTGGAAGTGGGCAAGCACGCAATCATGCGCCGGACGGGTTTGCCTGCGCGCGATCTTCGGATTTTGGATCCTTTATTGTCGTATCCATCAACCATTTTGGGCCGTGAGAGAGCGATTGTGATTAATCTGGAGCATATTAAAGCCATTATCACGGCTCAAGAGGTGCTTCTGTTGAACTCTAGAGACCCCTCGGTGACGCCCTTTGTCGAAGAGCTACAGAGACGGATACTGCGTCACCACCAAGCCACCAAGGCACAAGAGGGCAAGGGCGCTGATTCAAATTGGACTGATATCTATGATTTGGGAGAGGCAAGATCAAGGGCTGTAAGTCCAGAAAATCCATATCAAGGATTTCCACAGTCTCAAGAAGGAAAAGAGGAAGGAAAGGAAGGTGGGAAACAAGGTCTTGATAACCACGATGGATTAAAGGTTCTCCCATTTGAGTTTGTTGCATTGGAAGCATGCCTTGAATCTACTTGCAGTAACTTAGAGAGTGAAGCTAAGACATTGGAGCAAGAGGCTCACCCAGCTTTGGATAAGCTGACTTCCAAGATCAGTACTCTCAATTTGGAACGTGTTCGTCAAATCAAAAGCCGATTGGTTGCAATAACTGGTCGAGTGCAAAAGATGAGGGATGAATTAGAACATTTGCTTGATGACGATGATGATATGGCAGAGATGTATTTGACAGAGAAGTTGGCTCAACAACAACTAGAGAACTCTTCCACATCCTCAATGGATGATGGAAATAACAAGGACGATGAAGCTCTTCCCTCAGATATCGATTTCAGGCACTGTATCAGGTTACCTGCCGAAATATCAGTAGATGGTGGTGGCATCCCGAGTAATTATGAAAGTGACATCCAGAACAATGAAGAACCTCAACACCCGCTTTTTGGTGGACCTAATGCACTTAGCCATGGAACCCATACGAGCACGACTCATAGTGCTTTAAGCAAACACCTTGATGTGGAGGAGCTTGAAATGCTTTTAGAGGCATATTTTGTTCAAATCGATGGTACTTCAAACAACCTATCTACGCTTCGAGAGTACGTGGACGACACAGAAGATTACATAAACATAATGTTGGACGACAAACAGAACCATCTTCTCCAAATGGGAGTTATGTTAACGACAGCAACTCTCGTGGTCAGTGCCTTTGTTGTGGTGGCTGGAATATTTGGCATGAACATACACATTGAGCTCTTTGACCCGGCAATAGCAGGTATGCGTGAATTTCTTTGGACGGTTGGTGGAAGTGCCGCAGGAAGCGTTGTCCTCTATGTGATTGCCATTGCTTGGTGCAAATACAAACGCTTGCTTGAGTGA 1509 47.51 MARGYPPHPSKPGLPATEDDGDPTRLASVALGASVGGGLRKKGIGVRAWLLLDSTGVAQVVEVGKHAIMRRTGLPARDLRILDPLLSYPSTILGRERAIVINLEHIKAIITAQEVLLLNSRDPSVTPFVEELQRRILRHHQATKAQEGKGADSNWTDIYDLGEARSRAVSPENPYQGFPQSQEGKEEGKEGGKQGLDNHDGLKVLPFEFVALEACLESTCSNLESEAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKMRDELEHLLDDDDDMAEMYLTEKLAQQQLENSSTSSMDDGNNKDDEALPSDIDFRHCIRLPAEISVDGGGIPSNYESDIQNNEEPQHPLFGGPNALSHGTHTSTTHSALSKHLDVEELEMLLEAYFVQIDGTSNNLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGIFGMNIHIELFDPAIAGMREFLWTVGGSAAGSVVLYVIAIAWCKYKRLLE 502
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 41159073 41162687 + Bda022982.1 Bda06g01174 8756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g01174 502 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 33 502 IPR039204 -
Bda06g01174 502 MobiDBLite consensus disorder prediction 338 358 - -
Bda06g01174 502 CDD Mrs2_Mfm1p-like 49 500 IPR039204 -
Bda06g01174 502 Pfam CorA-like Mg2+ transporter protein 385 492 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Bda06g01174 502 Gene3D - 41 120 - -
Bda06g01174 502 PANTHER MAGNESIUM TRANSPORTER MRS2-D-RELATED 33 502 - -
Bda06g01174 502 Gene3D Magnesium transport protein CorA, transmembrane region 193 430 - -
Bda06g01174 502 MobiDBLite consensus disorder prediction 166 197 - -
Bda06g01174 502 MobiDBLite consensus disorder prediction 296 318 - -
Bda06g01174 502 Coils Coil 213 233 - -
Bda06g01174 502 MobiDBLite consensus disorder prediction 183 197 - -
Bda06g01174 502 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g01157 Bda-Chr6:40677048 Bda06g01174 Bda-Chr6:41159073 0 dispersed
Bda06g01165 Bda-Chr6:40987584 Bda06g01174 Bda-Chr6:41159073 0 dispersed
Bda06g01174 Bda-Chr6:41159073 Bda12g00562 Bda-Chr12:9654647 1.18E-114 dispersed
Bda06g01174 Bda-Chr6:41159073 Bda06g01175 Bda-Chr6:41170785 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g01174 - - mnt:21394404 700.279