Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g01175 ATGGCGCGGGGTTATCCTCCCCACCTATCGAAGCCCGGTCTCCCCGCGACGGAGGACGACGCTGATCCGACCCGTTTAGCCTCCGTGGCGTTAGGGGCTTCCGTGGGCGGTGGACTCCGGAAGAAGGGAATTGGGGTTAGGGCGTGGCTGCTTTTGGACTCTACCGGTGTTGCGCAGGTCGTGGAGGTGGGCAAGCACGCAATCATGCGCCGGACGGGTTTGCCTGCGCGCGATCTTCGGATTTTGGATCCTTTATTGTCGTATCCTTCAACCATTTTGGGCCGTGAGAGAGCGATTGTGATTAATCTGGAGCATATTAAAGCCATTATCACGGCTCAAGAGGTGCTTCTGTTGAACTCTAGAGACCCCTCGGTGACGCCCTTTGTTGAAGAGCTACAGAGACGGATACTGCGTCACCACCAAGTCACGAAGGCACAAGAGGGCAAGGGCGCTGATTCAAATTTGACTGATATCTATGATTTGGGAGAGGCAAGATCAAGGGCCGTAAGTCCAGAAAATTCATATCAAGGATTTCCACAGTCTCAAGAAGGAAAAGAGGAAGGAAAGGAAGGTGGGAAACAATGTCTTGATAACCACGACGGATTAAAGGTTCTCCCATTTGAGTTTGTTGCATTGGAAGCATGCCTTGAATCTACTTGCAGTAACTTAGAGAGCGAAGCTAAGACATTGGAGCAAGAGGCTCATCCAGCTTTGGATAAGCTGACTTCCCAGATCAGTACTATCAATTTGGAACGTGTTCGTCAAATCAAAAGCCGATTGGTTGCAATAACTGGTCGAGTGCAAAAGATGAGGGATGAATTAGAACATTTGCTTGATGACGATGATGATATGGCAGAGATGTATTTGACAGAGAAGTTGGCTCAACAACAACTAGAAAACTCTTCCACATCCTCAATGGATGATGGAAATAACATGGACGATGAAGCTCTTCCCTCAGATATCGACTCCAGGCACTGTATCAGGTTACCTGCCGAAATATCAGTAGATGGCGGTGGCATCCCGAGTAATTATGAAAGTGACATCCAGAACAATGAAGAACCTCAACACCCGCTTTTTGGTGGACCTAATGCACTAAGCCATGGAACCCATATAAGCACTACTCATAGTGCTTTAAGCAAACACCTTGATGTGGAGGAGCTTGAAATGCTTTTAGAGGCCTACTTTGTTCAAATCGATGGTACATCAAATAAACTATCTACGCTTCGAGAGTACGTGGCCGACACAGAAGATTACATAAACATAATGTTGGACGACAAGCAGAACCATCTTCTCCAAATGGGAGTTTTGTTAACGACGGCAACTCTCGTGGTCAGCGCCTTTGTTGTGGTGTCTAGTATATTTGGCATGAACATACACATCGAGCTCTTTAACGTGGAAATAGGAAGTCCGCATGAATTTCTTTGGACGGTCGGTGCAAGTGTCGCAGGAAGCGTTGTCCTCTATGTGATTGCCATTGCTTGGTGCAAACACAAACGCTTGCTTGAGTGA 1509 47.45 MARGYPPHLSKPGLPATEDDADPTRLASVALGASVGGGLRKKGIGVRAWLLLDSTGVAQVVEVGKHAIMRRTGLPARDLRILDPLLSYPSTILGRERAIVINLEHIKAIITAQEVLLLNSRDPSVTPFVEELQRRILRHHQVTKAQEGKGADSNLTDIYDLGEARSRAVSPENSYQGFPQSQEGKEEGKEGGKQCLDNHDGLKVLPFEFVALEACLESTCSNLESEAKTLEQEAHPALDKLTSQISTINLERVRQIKSRLVAITGRVQKMRDELEHLLDDDDDMAEMYLTEKLAQQQLENSSTSSMDDGNNMDDEALPSDIDSRHCIRLPAEISVDGGGIPSNYESDIQNNEEPQHPLFGGPNALSHGTHISTTHSALSKHLDVEELEMLLEAYFVQIDGTSNKLSTLREYVADTEDYINIMLDDKQNHLLQMGVLLTTATLVVSAFVVVSSIFGMNIHIELFNVEIGSPHEFLWTVGASVAGSVVLYVIAIAWCKHKRLLE 502
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 41170785 41175600 + Bda022983.1 Bda06g01175 8757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g01175 502 CDD Mrs2_Mfm1p-like 49 500 IPR039204 -
Bda06g01175 502 Gene3D - 41 120 - -
Bda06g01175 502 Gene3D Magnesium transport protein CorA, transmembrane region 187 430 - -
Bda06g01175 502 PANTHER MAGNESIUM TRANSPORTER MRS2-D-RELATED 33 502 - -
Bda06g01175 502 MobiDBLite consensus disorder prediction 1 21 - -
Bda06g01175 502 Coils Coil 213 233 - -
Bda06g01175 502 MobiDBLite consensus disorder prediction 167 194 - -
Bda06g01175 502 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 33 502 IPR039204 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g01175 Bda-Chr6:41170785 Bda12g00562 Bda-Chr12:9654647 8.10E-109 dispersed
Bda06g01174 Bda-Chr6:41159073 Bda06g01175 Bda-Chr6:41170785 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g01175 - - mnt:21394404 667.922