Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g01210 TATCTCTCTGTTCCAGTATTGATGTTGAGGTCGTGTTGCAGGCCATTAGAGCGTTGCTTTGGCTTTCGAGGTGGAGGTGATAGTCTTTTGTGGCATACGGATTTGAAGCATCATGCTTCTGGGGATTACTCGATTGCCGTTGTTCAAGCGAATTTGAGTCTTGAGGATCAGAGTCAGGTTTTTACGTCACCGGCTGCTACTTATGTTGGTGTTTACGACGGCCATGGCGGTCCTGAAGCTTCTCGATTCGTCCACAAACATCTTTTTCCTTATTTGCATAAGTTCGCTATAGAACATGGAGAGCTATCGGCCGATGTCATTAAAAAGGCCTTTAATGCCACAGAGGAGGACTTCTATCGATTAGTGAAGCGATCACTACCAGCAATGCCGCAGATTGCTTCAGTCGGATCGTGCTGTCTGCTAGGTGCTATTTCAAACGATAATTTGTTTGTGGCAAATCTTGGGGACTCGAGAGCTGTTCTAGGCCGAAAAGCTTCATCCGGAAATAAAAATCCAGTGGTGGCAGAAAGGTTATCCACTGATCACAATGTGGGAGTTGAGGAGGTGAGAAAGGAAGTCCAAGCACTTCATCCCGACGATGCTCATATCGTGGTGTATAATCGCGGAGTCTGGAGGATAAAGGGGATAATTCAGGTATCGAGATCGATAGGCGATGTTTACTTGAAGAAACCGGAAGTTAATAGAGATGCGAACTTCAGGCAATTTGGAAATCCCGTTCCTCTTAGGCGACCAGTGATGACAGCAGAACCCTCCATCCTGTTTAGAAACCTCACTCCTCAAGACTTGTTCCTCATATTTGCGTCCGACGGTCTTTGGGAACAGCTGAGCGACCAAGCTGCTGTCGATATCGTTTTCAACAACCCAAGAACTGGAATTGCAAAGAGATTAGTAAGGGAGGCACTTCGAACGGCTGCAAAGAAGCGAGAAATGAGATACGACGACGTGAAGAAACTAGAAAGGGGCATAAGGCGTCATTTCCACGACGACATATCAGTGATAGTAGTTTATCTCGATCATCACAAGAAAAGCGTCTCCAAGCCCGGACTCGATCTGAACACGATAGGCTGCACCAATTCACCGGTCGATATCTTCTCTTTAAGCACAGATGGAGCCCAGTAA 1140 46.49 YLSVPVLMLRSCCRPLERCFGFRGGGDSLLWHTDLKHHASGDYSIAVVQANLSLEDQSQVFTSPAATYVGVYDGHGGPEASRFVHKHLFPYLHKFAIEHGELSADVIKKAFNATEEDFYRLVKRSLPAMPQIASVGSCCLLGAISNDNLFVANLGDSRAVLGRKASSGNKNPVVAERLSTDHNVGVEEVRKEVQALHPDDAHIVVYNRGVWRIKGIIQVSRSIGDVYLKKPEVNRDANFRQFGNPVPLRRPVMTAEPSILFRNLTPQDLFLIFASDGLWEQLSDQAAVDIVFNNPRTGIAKRLVREALRTAAKKREMRYDDVKKLERGIRRHFHDDISVIVVYLDHHKKSVSKPGLDLNTIGCTNSPVDIFSLSTDGAQ 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 41936737 41938687 + Bda023029.1 Bda06g01210 8792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g01210 379 PANTHER ALPHABET, ISOFORM E-RELATED 10 378 - -
Bda06g01210 379 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 10 378 - -
Bda06g01210 379 ProSiteProfiles PPM-type phosphatase domain profile. 42 344 IPR001932 -
Bda06g01210 379 Gene3D - 31 353 IPR036457 -
Bda06g01210 379 ProSitePatterns PPM-type phosphatase domain signature. 68 76 IPR000222 GO:0043169
Bda06g01210 379 SMART PP2C_4 32 342 IPR001932 -
Bda06g01210 379 CDD PP2Cc 49 344 IPR001932 -
Bda06g01210 379 Pfam Protein phosphatase 2C 63 313 IPR001932 -
Bda06g01210 379 SUPERFAMILY PP2C-like 49 347 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g01210 Bda-Chr6:41936737 Bda14g00978 Bda-Chr14:7906517 6.27E-139 dispersed
Bda06g01210 Bda-Chr6:41936737 Bda14g00960 Bda-Chr14:7730172 3.47E-138 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g01210 - K01102 zju:107427140 607.831