Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g01226 ATGGACTTGATTAATGGTATCACAGGTGCTGATGAAGAGGGTCGGTCTCGGCAAAGGATTCTCACTTTTGCTGCACGGAGATATGCTAGTGCAATAGTGAGAAATCCTGAAGATTATGATGCACTCTACAACTGGGCTTTGGTTCTTCAGGAGAGTGCTGATAATGTTAGTCAAGACTCTGGTTCATCGTCTAAAGATGCTTTGCTTGAGGAGGCTTGTAAAAAATATGATGAAGCTACCCGTCTTTGCCCAACACTTCATGATGCTTTCTATAATTGGGCTATTGCAATTTCTGATCGAGCAAAGATGCGTGGTCGTACTAAAGAGGCTGAAGAACTGTGGAAGCAGGCAACCAAAAATTATGAAAAAGCTGTCCAACTCAACTGGAATAGTCCGCAGGCATTAAACAATTGGGGACTTGCACTGCAGGAACTTAGTGCAATTGTTCCTGTACGAGAAAAGCAGAAAATTGTGAGAACGGCTATAAGTAAGTTCCGCGCTGCAATACAGTTGCAATACGATTTCCACCGAGCAATTTACAACCTTGGGACTGTTTTGTATGGATTAGCCGAGGACACATTAAGAACTGGGGGTTCAGGAAATCCTAAAGAAGTTTCTCCCGACGAGTTATACTGTCAATCTGCTATCTATATTACAGCTGCTCATGCTTTGAAACCAAATTACTCTGTTTACAGCAGTGCCCTGCGTCTGGTTCGTTCCATGTTACCTTTACCCTATCTAAAAGTTGGATATCTGACTGCACCTCCTGTGGGCAAAGTAGTTGCCCCCCATAGTGATTGGAAACGGTTCCAGTTCGTTCTGAATCAAGAAGGGCTTCAGCAGCTTCATATAGAGGATCAAAAACAAGTGATCCATAGCCTCTCTGGTAGATCTGGAACTGCAGGGAGTGTCGAGAAAAAGGCTGTGAAAGTTGATGTTCCAGATATTGTATCTGTGTCAGCCTGTTCTGATCTGACTTTACCACCAGGTGCAGGCCTTTGCATTGACACTATACATGGACCTGTTTTCTTGGTTGCCGACTCTTGGGAATCGCTTGATGGGTGGTTAGATGCAATTCGTCTGGTGTACACCATTTATGCAGATGACATACGAAGGGAGGCTCAAACCATGAGTTTAATTGATCATCCAAATGTTGTAAGAGCATATTGCTCGTTTGTGGTTGAACGGAACCTATGGGTTGTCATGCCATTTATGGCAGAGGGTTCTTGTTTGCATCTTATGAAGATAGCATATCCAGATGGATTTGAAGAGGATGCTATTGGATCTATACTAAAAGAAACTCTTAAAGCTTTGGAGTACCTTCATTTCCAAGGACATATTCACCGAGATGTAAAGGCTGGAAATATATTACTCGATAACAATGGAGTGGTAAAGCTTGCTGACTTTGGTGTTTCTGCTTGCATGTTTGACACCGGTGATAGACAACGATCTAGAAATACATTTGTAGGAACTCCATGCTGGATGGCACCAGAGGTATTGCAACCAGGAAGTGGATATAATTTCAAGGCTGATATGTGGTCATTTGGTATTACAGCATTGGAGTTGGCTCATGGTCATGCACCATTTTCAAAATATCCTCCAATGAAAGTACTTCTCATGACCATTCAAAATGCTCCTCCTGGACTAGATTATGATCGCGATAAAAAATTCTCTAAGTCTTTTAAAGAAATGGTTGCAATGTGCCTGGTGAAAGATCAAATGAAGAGGCCGACTGCAGAAAAGCTGTTAAAACATTCATTTTTCAAGAATATAAAGTCTTCGGAGTTTTTAGTGAAGAAATTGTTTGATGACTTACCTCCTCTTTGGAATCGTGTAAAGGCACTCCAGCTTAAAGATGAAGCACAGCTAGCTCTAAAGAAAATGCCTTCTGCTGAACAAGAAGCACTATCACAGAGTGAGTACCAGCGAGGGGTTAGTGCATGGAACTTCGATATCGAGGATTTAAAAGCCCAAGCTTCATTGGTCCGTGATGATGATGATGATGATTTGGCAGAGATGAGGGAACATGAAGAAATCATCAAATCATTTGTTAGTGATAAGGGAACAGCACAATCAGCTGGCGAGGAGTTGGTGCAAGTTGAATGGTTGAGCAAAAAGGGTAAGACTATGGAAAACGAGTGGCCTGAATCTGGGACCCAAGAGAAAAGTGGTCTGAAAAAAATTGGGACTAGAACTGAGGCAGCAGCTTCTACTTCCGGCCAAGACATTACTCAGGCAAAGAATAAAATCCAAATTCCAAAACTTCGGCAAACATTGAGCGGGCCACTGATGCCTGGTGTTGTGCTCAGTCATTCATTATCAGAAAGAGCTCGTTACCCGGAGAGGTTCTTTCTAATTATTAGGTGTGAGTATGAAATTCAACCATCTGCAGAAAAAAATAATCGTGACCTCCGACAAACAACAAACTTTAGTGGTCCTTTGATGCTGCCAAATCGTGCTTCAGCAAACAGCTTATCTGCACCAATAAAGTCTTCTGGAGGATATAGAGATTCATTGGATGACAAGTCAAAGGCTAATCTCGTGCAAAAAGGGCGGTTTTCTGTAACATCAGAAAACTTGGATCTTGCTAAGGATATTCCATTAAGTACAGTTCCACGCAGATCTTCTCAGGTTGGTGACTGTTTTCAACCTTTCTCCAGCACAGTATATATAGGTATAAACTATCAATTTTCTCATTTAATCTTCCATTTGATATATTCACTGGGATCACCGCTAAGAAAATCAGCTAGCGTTGGTGATTGGACACTTGACTCAAAACAGATGCTCGTCAATCAATCCCTAAAGGAGCTTTCCAACAGTAATATACCCGCAACATTTTTCATGACTCACCTGCTGACACTTTATCAGCAGACTTCAATTCAACAGGTAAGAGTTTGCAGATACAGTGATTTTATATTTGGTTTTATCTGGAGAAGTTTTCTTACTATAAAAAGTTAA 2958 41.45 MDLINGITGADEEGRSRQRILTFAARRYASAIVRNPEDYDALYNWALVLQESADNVSQDSGSSSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNYEKAVQLNWNSPQALNNWGLALQELSAIVPVREKQKIVRTAISKFRAAIQLQYDFHRAIYNLGTVLYGLAEDTLRTGGSGNPKEVSPDELYCQSAIYITAAHALKPNYSVYSSALRLVRSMLPLPYLKVGYLTAPPVGKVVAPHSDWKRFQFVLNQEGLQQLHIEDQKQVIHSLSGRSGTAGSVEKKAVKVDVPDIVSVSACSDLTLPPGAGLCIDTIHGPVFLVADSWESLDGWLDAIRLVYTIYADDIRREAQTMSLIDHPNVVRAYCSFVVERNLWVVMPFMAEGSCLHLMKIAYPDGFEEDAIGSILKETLKALEYLHFQGHIHRDVKAGNILLDNNGVVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNFKADMWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQMKRPTAEKLLKHSFFKNIKSSEFLVKKLFDDLPPLWNRVKALQLKDEAQLALKKMPSAEQEALSQSEYQRGVSAWNFDIEDLKAQASLVRDDDDDDLAEMREHEEIIKSFVSDKGTAQSAGEELVQVEWLSKKGKTMENEWPESGTQEKSGLKKIGTRTEAAASTSGQDITQAKNKIQIPKLRQTLSGPLMPGVVLSHSLSERARYPERFFLIIRCEYEIQPSAEKNNRDLRQTTNFSGPLMLPNRASANSLSAPIKSSGGYRDSLDDKSKANLVQKGRFSVTSENLDLAKDIPLSTVPRRSSQVGDCFQPFSSTVYIGINYQFSHLIFHLIYSLGSPLRKSASVGDWTLDSKQMLVNQSLKELSNSNIPATFFMTHLLTLYQQTSIQQVRVCRYSDFIFGFIWRSFLTIKS 985
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 42217132 42241186 - Bda023052.4 Bda06g01226 8808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g01226 985 Pfam Protein kinase domain 368 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda06g01226 985 Pfam Plant specific mitochondrial import receptor subunit TOM20 114 184 - -
Bda06g01226 985 ProSiteProfiles Protein kinase domain profile. 290 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda06g01226 985 SUPERFAMILY TPR-like 24 145 IPR011990 GO:0005515
Bda06g01226 985 SUPERFAMILY Protein kinase-like (PK-like) 344 642 IPR011009 -
Bda06g01226 985 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 367 962 - -
Bda06g01226 985 Gene3D Phosphorylase Kinase; domain 1 361 406 - -
Bda06g01226 985 Coils Coil 614 634 - -
Bda06g01226 985 SMART serkin_6 332 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda06g01226 985 Gene3D Tetratricopeptide repeat domain 24 120 IPR011990 GO:0005515
Bda06g01226 985 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 367 962 - -
Bda06g01226 985 MobiDBLite consensus disorder prediction 732 748 - -
Bda06g01226 985 MobiDBLite consensus disorder prediction 708 748 - -
Bda06g01226 985 Gene3D Transferase(Phosphotransferase) domain 1 408 639 - -
Bda06g01226 985 Gene3D Tetratricopeptide repeat domain 121 244 IPR011990 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g01226 Bda-Chr6:42217132 Bda13g01619 Bda-Chr13:39677955 9.57E-147 dispersed
Bda06g01211 Bda-Chr6:41982305 Bda06g01226 Bda-Chr6:42217132 0 transposed
Bda07g01393 Bda-Chr7:16729340 Bda06g01226 Bda-Chr6:42217132 5.67E-06 transposed
Bda08g00655 Bda-Chr8:6798768 Bda06g01226 Bda-Chr6:42217132 0 transposed
Bda06g01226 Bda-Chr6:42217132 Bda08g00654 Bda-Chr8:6784267 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69687 PF00069 Pkinase 2.80E-51 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g01226 - - jre:108993778 840.876