Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g01264 ATGAGTTTTCAAGATATCGAGGCGGGTCGGCCCTTTGCTTATTCGAGGCGGGATGCAATCAATGGCAAGCAGGACCCGACACAGGCCGTAGCTTCTGGTATATTTCAGATCAACACCGCTGTCGCCACCTTTCAGAGGCTCGTCAATACTCTGGGAACTCCGAAGGACACCCCCGAGCTCCGAGAGAAGCTGCACAAGACGAGGCTTCATATTGGACAGTTGGTGAAAGATACTTCTGCAAGACTAAAACAAGCTAGTGAAATAGATCATCAAACTGAAGTTAAAGCCAGCAAGAAAATTGCAGATGCGAAGCTCGCTAAAGACTTTCAAGCCGTGCTGAAAGAATTTCAAAAGGGTCAACGACTTGCAGCCGAGAGAGAAACTGCATATACTCCTTTTATTCCACAAGCAGTTCTCCCTTCTAGCTACACGGCCAGCGAGATCGATGTACGATCAGATGAGAATCCCGAACAGCGTGCACTCCTTGTTGAATCTAGGAGACAAGAAGTACTGCTTTTGGACAACGAAATTTCCTTTAACGAGGCAATAATCGAGGAAAGAGAGCAAGGGATCGAAGAAATACAACAGCAAATAGGGGAAGTGAATGAGATTTTCAAAGATTTAGCAGTTCTGGTGCATGAGCAGGGAGCCATGATTGACGATATTGGATCCAACATCGAGAGTTCCCACGCTGCAACTTCGCAAGCAACTTCCCAACTCGTGAAAGCCGCAAAGACCCAAAGATCAAATTCATCACTGTCCTGCTTGCTGTTGGTGATCTTTGGGATATTGCTTCTCATTGTTATCATACTCGTCGCAGCTTGA 825 46.42 MSFQDIEAGRPFAYSRRDAINGKQDPTQAVASGIFQINTAVATFQRLVNTLGTPKDTPELREKLHKTRLHIGQLVKDTSARLKQASEIDHQTEVKASKKIADAKLAKDFQAVLKEFQKGQRLAAERETAYTPFIPQAVLPSSYTASEIDVRSDENPEQRALLVESRRQEVLLLDNEISFNEAIIEEREQGIEEIQQQIGEVNEIFKDLAVLVHEQGAMIDDIGSNIESSHAATSQATSQLVKAAKTQRSNSSLSCLLLVIFGILLLIVIILVAA 274
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 43152956 43156557 - Bda023106.1 Bda06g01264 8846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g01264 274 Gene3D - 20 133 - -
Bda06g01264 274 Gene3D - 174 274 - -
Bda06g01264 274 Pfam Syntaxin-like protein 31 130 IPR006011 GO:0016020
Bda06g01264 274 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 181 243 IPR000727 -
Bda06g01264 274 SUPERFAMILY t-snare proteins 24 236 IPR010989 GO:0016020|GO:0016192
Bda06g01264 274 SMART SynN_4 16 128 IPR006011 GO:0016020
Bda06g01264 274 SMART tSNARE_6 176 243 IPR000727 -
Bda06g01264 274 ProSitePatterns Syntaxin / epimorphin family signature. 187 226 IPR006012 GO:0005484|GO:0006886|GO:0016020
Bda06g01264 274 CDD SNARE_Qa 184 242 - -
Bda06g01264 274 Pfam SNARE domain 218 269 IPR000727 -
Bda06g01264 274 PANTHER SYNTAXIN OF PLANTS PROTEIN 7 273 - -
Bda06g01264 274 PANTHER SYNTAXIN 7 273 IPR045242 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g01264 Bda-Chr6:43152956 Bda08g00639 Bda-Chr8:6575545 1.45E-176 dispersed
Bda06g01261 Bda-Chr6:43102901 Bda06g01264 Bda-Chr6:43152956 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g01264 - K08488 bhj:120089793 418.313