Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g01272 GAGAGAATGACTCCGGAAGGTCTTTTCTCTGACGATTTCTTCAACTTCATAACCTGTGACACAAACTCTCAAACCCCACACTGTTATCCAGGCAATTCCAGCAACACCAAATTCTTCCTAGATGCTAGTTTGGCACCTCAGGGCCTAGCAGTTTCGACTGATAACAACTCGTTGAAAGTTAGAAATAGCCTCCTTTGCTGGCCGGAAAACGGCGACAGCTTCCGGAATTCCGGGGGGCGAAGGAGGGAAAAAAGGAGGAGAAGCACGAGAGTGTTTAAGAACAATGAGGCAGCGGAAACTCGAAGGATGACTCATATTGCCATGGAAAGAAACAGAAGGAAGCAAATGAATGAGCATTTTGCTGTCTTGCATTCTCTCATGCCTCCATCTTATGCTCCAAGGGGTGATCAAGCCTCAATAGTAGGGGGGGCCATACAACTTGTGAAGGAGCATGAGCATCTCCTGCAGATCCTCGAAGCTCAAAAGCTGCAACTTGATCAAGAAAAATTAGAGCAAGATCAAAGCCAAACTGAAGAGAAGATTAACAAAGAAATAATATTTTCACCTCCCTTCTCACAGTTCTTTGAGAACCCACAATTTGATTGGTCTCAAAACCCTAAAAATACTAATGCCATGGCCATGGCTGATGTGAAAGTGAGCTTGGTTGGAATCCATGCAAATCTCAGAATCCTCTCTAGAAAAAACCCTAGACATCTCTCCTCTTTTGTTGCTGGATTTCAGGCTATCGGTTTAGCTGTTCTTCATCTCAAAGTCACCACTATGGACTCTCTTGTTCTTTACTCTATTAATGCGAAGGTTGAAGAAAGATGCCGATTAAGAGGTGTAGATGAAATAGCGGCTGCAGTTCATCACATACTTGGAATAAGGGAAGAAGAAGAGATCAATTATATGCCGAGTATACCCTTATAG 930 43.44 ERMTPEGLFSDDFFNFITCDTNSQTPHCYPGNSSNTKFFLDASLAPQGLAVSTDNNSLKVRNSLLCWPENGDSFRNSGGRRREKRRRSTRVFKNNEAAETRRMTHIAMERNRRKQMNEHFAVLHSLMPPSYAPRGDQASIVGGAIQLVKEHEHLLQILEAQKLQLDQEKLEQDQSQTEEKINKEIIFSPPFSQFFENPQFDWSQNPKNTNAMAMADVKVSLVGIHANLRILSRKNPRHLSSFVAGFQAIGLAVLHLKVTTMDSLVLYSINAKVEERCRLRGVDEIAAAVHHILGIREEEEINYMPSIPL 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 43303342 43305997 + Bda023117.1 Bda06g01272 8854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g01272 309 Pfam Helix-loop-helix DNA-binding domain 101 150 IPR011598 GO:0046983
Bda06g01272 309 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 100 167 IPR036638 GO:0046983
Bda06g01272 309 PANTHER TRANSCRIPTION FACTOR BHLH71 69 301 - -
Bda06g01272 309 Coils Coil 148 180 - -
Bda06g01272 309 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 100 151 IPR011598 GO:0046983
Bda06g01272 309 Gene3D - 92 184 IPR036638 GO:0046983
Bda06g01272 309 SMART finulus 106 157 IPR011598 GO:0046983
Bda06g01272 309 PANTHER MAX DIMERIZATION, MAD 69 301 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g01272 Bda08g00632 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g01272 Bda-Chr6:43303342 Bda06g01292 Bda-Chr6:43526317 0 dispersed
Bda15g00775 Bda-Chr15:11598979 Bda06g01272 Bda-Chr6:43303342 1.43E-11 dispersed
Bda06g01272 Bda-Chr6:43303342 Bda08g00632 Bda-Chr8:6507919 1.54E-123 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16063 PF00010 HLH 3.30E-09 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g01272 - - jre:108982006 274.633