Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda06g01272 | GAGAGAATGACTCCGGAAGGTCTTTTCTCTGACGATTTCTTCAACTTCATAACCTGTGACACAAACTCTCAAACCCCACACTGTTATCCAGGCAATTCCAGCAACACCAAATTCTTCCTAGATGCTAGTTTGGCACCTCAGGGCCTAGCAGTTTCGACTGATAACAACTCGTTGAAAGTTAGAAATAGCCTCCTTTGCTGGCCGGAAAACGGCGACAGCTTCCGGAATTCCGGGGGGCGAAGGAGGGAAAAAAGGAGGAGAAGCACGAGAGTGTTTAAGAACAATGAGGCAGCGGAAACTCGAAGGATGACTCATATTGCCATGGAAAGAAACAGAAGGAAGCAAATGAATGAGCATTTTGCTGTCTTGCATTCTCTCATGCCTCCATCTTATGCTCCAAGGGGTGATCAAGCCTCAATAGTAGGGGGGGCCATACAACTTGTGAAGGAGCATGAGCATCTCCTGCAGATCCTCGAAGCTCAAAAGCTGCAACTTGATCAAGAAAAATTAGAGCAAGATCAAAGCCAAACTGAAGAGAAGATTAACAAAGAAATAATATTTTCACCTCCCTTCTCACAGTTCTTTGAGAACCCACAATTTGATTGGTCTCAAAACCCTAAAAATACTAATGCCATGGCCATGGCTGATGTGAAAGTGAGCTTGGTTGGAATCCATGCAAATCTCAGAATCCTCTCTAGAAAAAACCCTAGACATCTCTCCTCTTTTGTTGCTGGATTTCAGGCTATCGGTTTAGCTGTTCTTCATCTCAAAGTCACCACTATGGACTCTCTTGTTCTTTACTCTATTAATGCGAAGGTTGAAGAAAGATGCCGATTAAGAGGTGTAGATGAAATAGCGGCTGCAGTTCATCACATACTTGGAATAAGGGAAGAAGAAGAGATCAATTATATGCCGAGTATACCCTTATAG | 930 | 43.44 | ERMTPEGLFSDDFFNFITCDTNSQTPHCYPGNSSNTKFFLDASLAPQGLAVSTDNNSLKVRNSLLCWPENGDSFRNSGGRRREKRRRSTRVFKNNEAAETRRMTHIAMERNRRKQMNEHFAVLHSLMPPSYAPRGDQASIVGGAIQLVKEHEHLLQILEAQKLQLDQEKLEQDQSQTEEKINKEIIFSPPFSQFFENPQFDWSQNPKNTNAMAMADVKVSLVGIHANLRILSRKNPRHLSSFVAGFQAIGLAVLHLKVTTMDSLVLYSINAKVEERCRLRGVDEIAAAVHHILGIREEEEINYMPSIPL | 309 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 43303342 | 43305997 | + | Bda023117.1 | Bda06g01272 | 8854 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda06g01272 | 309 | Pfam | Helix-loop-helix DNA-binding domain | 101 | 150 | IPR011598 | GO:0046983 | |
Bda06g01272 | 309 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 100 | 167 | IPR036638 | GO:0046983 | |
Bda06g01272 | 309 | PANTHER | TRANSCRIPTION FACTOR BHLH71 | 69 | 301 | - | - | |
Bda06g01272 | 309 | Coils | Coil | 148 | 180 | - | - | |
Bda06g01272 | 309 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 100 | 151 | IPR011598 | GO:0046983 | |
Bda06g01272 | 309 | Gene3D | - | 92 | 184 | IPR036638 | GO:0046983 | |
Bda06g01272 | 309 | SMART | finulus | 106 | 157 | IPR011598 | GO:0046983 | |
Bda06g01272 | 309 | PANTHER | MAX DIMERIZATION, MAD | 69 | 301 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda06g01272 | Bda08g00632 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda06g01272 | Bda-Chr6:43303342 | Bda06g01292 | Bda-Chr6:43526317 | 0 | dispersed | |
Bda15g00775 | Bda-Chr15:11598979 | Bda06g01272 | Bda-Chr6:43303342 | 1.43E-11 | dispersed | |
Bda06g01272 | Bda-Chr6:43303342 | Bda08g00632 | Bda-Chr8:6507919 | 1.54E-123 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16063 | PF00010 | HLH | 3.30E-09 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda06g01272 | - | - | jre:108982006 | 274.633 |