Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g01276 ATGGGAAGTGGAGTTTCCAGCCTCGTCTCCTGTCTGAAACCGGCCGACCGGACGACTACGCACCCCGACCATAATTTGCACCGCCATCAGGACGTCCTCTTCGCCGCCTCTGAGCCTCTTGATGAAACCCTCGGTCATTCCTTCTGTTACGTGAGGTCTTCGGCTCGCTTCCTCTCCCCAACTCACTCCGATCGTTTTCTGTCTCCTTCTCATTCTCTCCGTTTCTCCCGGAAAGTTTGCGGGTATTTGGCTCGACCGCCGCCGCCGGAGACTGGGTTCAAGGCCATTTCCGGAGCTTCGGTGAGTGCGAATAGCTCTACTTCCAGATCTGTCCTCCTGCTTGATAATATTTACGACTATGCCACTGAAAGTACGTTCGGTACTGGTGGAGGTGGCGGCGGTGTGAGGGGGAGCATCGTCAATGGCTTCGAGAGTTCGTCTTCGTTTTGCGCTCTTCCTCTTCAGCCGGTTCCGAGAGGTGGAGCGGAGCCGTCCGGTCCAATGGAGCGGAGTGGCTTCTTTCTCTCCGGTCCAATCGAGCGCGGCGCTCTTTCTGGTCCACTGGATGCCAACGCTGCCTCTGATGGAAGTGGGAGAGTTCACTTTTCGGCTCCATTAGGCGGCCTCTATGTGAAAAAAAGACGGAAGACGCGCATTACGGGGATTCGGAAGGCGTTCTACCGGAACTTCTCAGAGAAGCGGCCGTGGGTGGTGCCCGTACTCAATTTCGCTGGCCGAAAGGAGGGCGGGGCTACCGGAGATGAGTCGGAGCTGAAGCATGAGAGTAATGTTCAATGGGCACTCGGGAAGGCCGGAGAGGATCGGGTGCATGTGGTTGTATCGGAAGAACAAGGGTGTTTGTTTGTTGGGATTTATGACGGATTCAACGGCCCTGATGCTCCAGAATTTTTGATGGCTAATCTTTATCGAGCAGTATACAATGAGCTTCAGGGGTTATTTTGGGAGGTTGAAGAGGCAGAAGAGCCTCCTAATGTTCCTCGGTCAAATGCAGTTGCAGAAGATGCATCAACGAAAGATGCTGAGGAAGTAGTTGATAAAGGCAGTGATGTTTCATTAGTGTGTAATAATTCAGACCCTCCCGCTGCTGGACCAGCCAAGAGAGTTACATTTCAATCCGAGGAAGGATCGGAGTCTAGAAGGAGAAGGCAGCTTTGGGAATTCTTGGCCGAAGATGATCCTGAATACGGGCTCGATCTTTCAGGATCGGATAGATTTGCATTTTCAGTTGACGAAGCTCTTAGTGTAAGCAATGCCGGTTCTATGGCCAGAAGGCAGTGGCTGCTTTTGTCAAGATTGAAACATGGGTGGTCTAAGCATAAGGAAGGTCATGGTAGGAAGTTGTTTTCGTGGAGTTTTAGATTGGAGGACAAAGAGAAGGTAGAGGTTGAGAATAAGGTAGAGGATAAGCCATTTCGGACTGGTAAGAGGCGGAACGAGGGTCCTGTGGATCACGAGTTGGTTTTGGGAGCATTATCGCGGGCTTTGGAAGTAACTGAGTTAGCTTACTTGGATATGACAGACAAGGTACTTGACACAAATCCAGAGCTTGCATTAATGGGTTCTTGCTTGTTAGCTGTGTTAATGAGAGATGAGGATGTGTATGTCATGAATGTTGGTGATAGTCGTGCAATCGTCGCCCAATACGAAACTCGAGAGGTTGGTCTTGTTGAGAAGTTGGAGGAGACGGGAGAAGAGAGATCTTCTATGGGAGGTATAATGGAGGAATCATCAGCTCCAAGAGTACGGGAGAATGTTAAAGAAATTACATCAGGAAATGAGTCTTCTTATCAAGGGACGAGTTTGGTCGCATTGCAGCTATCAACCGATCACAGCACCAGCGTTGAAGATGAAATCACAAGGATAAAGAATGAACATCCAGATGACAAACACTGTATTGTTAATGATAGAGTGAAAGGTCGTCTCAAGGTCACAAGGGCGTTTGGTGCTGGATTTCTTAAACAGAATATGCATTCTACAAAGCTAATGTACATTTTATCCATGTTTATTTCGGAGCAGCCAAAGTTGAATGCTGCATTATTGGAAATGTTTCGCAATGAATACATCGGCACTGCTCCGTACCTATCCTGCTCGCCTTCTCTTCGGCACCACAGACTTTGTCCAATGGATCAGTTCTTAGTTCTCTCGTCCGACGGTCTATACCAGTATCTAAGCAATCAGGAAGTGGTTTCTCATGTGGAAAATTTTATGGAGAAGTTTCCAGATGGAGATCCTGCTCAACACTTAATAGAGGAGCTTCTATCCCGGGCAGCCAAAAAAGCCGGTAAGTGTCCAGTTATTTTTGTGATTAAGGCTCTGGTTTGGTTTGAAGGGATGGATTTTCATGAATTATTGGACATTCCCCAAGGAGATCGTCGAAAATATCACGACGATGTAACTGTGATGATTATTTCGCTCGAGGGAAGAATTTGGAAATCTTCAGGAAAGTACCCTTGA 2475 48.2 MGSGVSSLVSCLKPADRTTTHPDHNLHRHQDVLFAASEPLDETLGHSFCYVRSSARFLSPTHSDRFLSPSHSLRFSRKVCGYLARPPPPETGFKAISGASVSANSSTSRSVLLLDNIYDYATESTFGTGGGGGGVRGSIVNGFESSSSFCALPLQPVPRGGAEPSGPMERSGFFLSGPIERGALSGPLDANAASDGSGRVHFSAPLGGLYVKKRRKTRITGIRKAFYRNFSEKRPWVVPVLNFAGRKEGGATGDESELKHESNVQWALGKAGEDRVHVVVSEEQGCLFVGIYDGFNGPDAPEFLMANLYRAVYNELQGLFWEVEEAEEPPNVPRSNAVAEDASTKDAEEVVDKGSDVSLVCNNSDPPAAGPAKRVTFQSEEGSESRRRRQLWEFLAEDDPEYGLDLSGSDRFAFSVDEALSVSNAGSMARRQWLLLSRLKHGWSKHKEGHGRKLFSWSFRLEDKEKVEVENKVEDKPFRTGKRRNEGPVDHELVLGALSRALEVTELAYLDMTDKVLDTNPELALMGSCLLAVLMRDEDVYVMNVGDSRAIVAQYETREVGLVEKLEETGEERSSMGGIMEESSAPRVRENVKEITSGNESSYQGTSLVALQLSTDHSTSVEDEITRIKNEHPDDKHCIVNDRVKGRLKVTRAFGAGFLKQNMHSTKLMYILSMFISEQPKLNAALLEMFRNEYIGTAPYLSCSPSLRHHRLCPMDQFLVLSSDGLYQYLSNQEVVSHVENFMEKFPDGDPAQHLIEELLSRAAKKAGKCPVIFVIKALVWFEGMDFHELLDIPQGDRRKYHDDVTVMIISLEGRIWKSSGKYP 824
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 43367904 43372633 - Bda023123.1 Bda06g01276 8858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g01276 824 PANTHER PROTEIN PHOSPHATASE 2C 29 25 822 - -
Bda06g01276 824 CDD PP2Cc 490 812 IPR001932 -
Bda06g01276 824 Gene3D - 246 819 IPR036457 -
Bda06g01276 824 PANTHER PROTEIN PHOSPHATASE 2C 25 822 IPR015655 GO:0004722|GO:0006470
Bda06g01276 824 SMART PP2C_4 257 810 IPR001932 -
Bda06g01276 824 ProSiteProfiles PPM-type phosphatase domain profile. 258 812 IPR001932 -
Bda06g01276 824 Pfam Protein phosphatase 2C 611 763 IPR001932 -
Bda06g01276 824 MobiDBLite consensus disorder prediction 568 588 - -
Bda06g01276 824 SUPERFAMILY PP2C-like 270 813 IPR036457 -
Bda06g01276 824 MobiDBLite consensus disorder prediction 363 382 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g01276 Bda08g00622 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g01276 Bda-Chr6:43367904 Bda09g01506 Bda-Chr9:46826262 1.16E-37 dispersed
Bda06g01276 Bda-Chr6:43367904 Bda06g01285 Bda-Chr6:43426806 0 proximal
Bda06g01276 Bda-Chr6:43367904 Bda08g00622 Bda-Chr8:6381269 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g01276 - - csv:101202795 1050.81