Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g01285 ATGGGAAGTGGAGTTTCCAGCCTCGTCTCCTGTCTGAAACCGGCCGACCGGACGACTACGCACCCCGACCATAATTCGCACCGCCATCAGGACGTCCTCTTCGCCGACTCTGAGCCTCTTGATGAAACCCTAGGTCATTCCTTCTGTTACGTGAGGTCTTCGGCTCGCTTCCTCTCCCCAACTCACTCCGATCGTTTTCTGTCTCCTTCTCATTCTCTCCGTTTCTCCCCTCCCCATGAATCGGCGGTGCAGAGGGCTCGACCGCCGCCGCCGCCGGAGACTGGGTTCAAGGCCATTTCCGGAGCTTCCGTGAGTGCGAATAGCTCTACTTCCAGATCTGTCCTCCTGCTTGATAATATTTACGACTATGCCACTGAAAGTACGTTCGGTACTGGTGGAGGTGGCGGCGGTGTGAGGGGGAGCATCGTCAATGGCTTCGAGAGTTCGTCTTCGTTTTGCGCTCTTCCTCTTCAGCCGGTTCCGAGAGGTGGAGCGGAGCCGTCCGGTCCAATGGAGCGGAGTGGCTTCTTTCTCTCCGGTCCAATCGAGCGCGGCGCTCTTTCTGGTCCACTGGATGCCAACGCTGCCTCTGATGGAAGTGGGAGAGTTCACTTTTCGGCTCCATTAGGCGGCCTCTATGTGAAAAAAAGACGGAAGACGCGCATTACGGGGATTCGGAAGGCGTTCTACCGGAACTTCTCAGAGAAGCGGCCGTGGGTGGTGCCCGTACTCAATTTCGCTGGCCGAAAGGAGGGCGGGGCTACCGGAGATGAGTCGGAGCTGAAGCATGAGAGTAATGTTCAATGGGCACTCGGGAAGGCCGGAGAGGATCGGGTGCATGTGGTTGTATCGGAAGAACAAGGGTGTTTGTTTGTTGGGATTTATGACGGATTCAACGGCCCTGATGCTCCAGAATTTTTGATGGCTAATCTTTATCGAGCAGTATACAATGAGCTTCAGGGGTTATTTTGGGAGGTTGAAGAGGCAGAAGAGCCTCCTAATGTTCCTCGGTCAAATGCAGTTGCAGAAGATGCATCAACGAAAGATGCTGAGGAAGTAGTTGATAAAGGCAGTGATGTTTCATTATACGGGCTTGATCTTTCAGGATCGGATAGATTTGCATTTTCAGTTGACGAAGCTCTTAGTGTAAGCAGTGCCGGTTCTATGGCCGGAAGGCAGTGGCTGCTTTTGTCAAGATTGAAACATGGGTGGTCTAAGCATAAGCAAGGTCATGGTAGGAAGTTGTTTTCATGGAGTTTTAGATTGGAGGACAAAGAGAAGGTAGAGTTTGAGAATAAGGTAGAGGATAAGCCATTTCGGACTGGTAAGACGCGGAACGAGGGTCCTGTGGATCACGAGTTGGTTTTGGGAGCATTATCTCGGGCTTTGGAATTAACTGAGTTAGCTTACTTGGATATGACAGACAAGGTACTTGACACAAATCCAGAGCTTGCATTAATGGGTTCTTGCTTGTTAGCTGTGTTAATGAGAGATGAGGATGTGTATGTCATGAATGTTGGTGATAGTCGTGCAATCGTCGCCCAATACGAAACTCGAGAGGTTGGTCTTGGTGAGAAGTTGGAGGAGACGGGAGAAGAGAGATCTTCTATGGGAGGTATAATGGAGGAATCATCAGCTCCAAGAGTACGGGAGAATGTTAAAGAAATTACATCAGGAAATGAGTTTTCTTATCAAGGGACGAGTTTGGTCGCATTGCAGCTATCAACCGATCACAGCACCAGCATTGAAGATGAAATCACAAGGATAAAGAATGAACATCCAGATGACAAACACTGTATTGTTAATGATAGAGTGAAAGGTCGTCTCAAGGTCACAAGGGCGTTCGGTGCTGGATTTCTTAAACAGAATATGCATTCTACAAAGCTAATGTACATTTCATCCATGTTTATTTGGGAGCAGCCAAAGTTGAATGCTGCATTATTGGAAATGTTTCGCAATGAATACATCGGCACTGCTCCGTACCTATCCTGCTCGCCTTCTCTTCGGCACCACAGACTTTGTCCAATGGATCAGTTCTTAGTTCTCTCGTCTGACGGTCTATACCAGTATCTAAGCAATCAGGAAGTGGTTTCTCATGTGGAAAATTTTATGGAGAAGTTTCCAGATGGAGATCCTGCTCAACACTTAATAGAGGAGCTTCTATCCCGGGCAGCCAAAAAAGCCGGTAAGTGTCCAGTTATTTTTGTGATTAAGGCTCTGGTTTGGTTTGAAGGGATGGATTTTCATGAATTATTGGACATTCCCCAAGGAGATCGTCGAAAATATCACGACGATGTAACTGTGATGATTATTTCGCTCGAGGGAAGAATTTGGAAATCTTCAGGAAAGTACCCTTGA 2358 48.26 MGSGVSSLVSCLKPADRTTTHPDHNSHRHQDVLFADSEPLDETLGHSFCYVRSSARFLSPTHSDRFLSPSHSLRFSPPHESAVQRARPPPPPETGFKAISGASVSANSSTSRSVLLLDNIYDYATESTFGTGGGGGGVRGSIVNGFESSSSFCALPLQPVPRGGAEPSGPMERSGFFLSGPIERGALSGPLDANAASDGSGRVHFSAPLGGLYVKKRRKTRITGIRKAFYRNFSEKRPWVVPVLNFAGRKEGGATGDESELKHESNVQWALGKAGEDRVHVVVSEEQGCLFVGIYDGFNGPDAPEFLMANLYRAVYNELQGLFWEVEEAEEPPNVPRSNAVAEDASTKDAEEVVDKGSDVSLYGLDLSGSDRFAFSVDEALSVSSAGSMAGRQWLLLSRLKHGWSKHKQGHGRKLFSWSFRLEDKEKVEFENKVEDKPFRTGKTRNEGPVDHELVLGALSRALELTELAYLDMTDKVLDTNPELALMGSCLLAVLMRDEDVYVMNVGDSRAIVAQYETREVGLGEKLEETGEERSSMGGIMEESSAPRVRENVKEITSGNEFSYQGTSLVALQLSTDHSTSIEDEITRIKNEHPDDKHCIVNDRVKGRLKVTRAFGAGFLKQNMHSTKLMYISSMFIWEQPKLNAALLEMFRNEYIGTAPYLSCSPSLRHHRLCPMDQFLVLSSDGLYQYLSNQEVVSHVENFMEKFPDGDPAQHLIEELLSRAAKKAGKCPVIFVIKALVWFEGMDFHELLDIPQGDRRKYHDDVTVMIISLEGRIWKSSGKYP 785
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 43426806 43431181 + Bda023132.1 Bda06g01285 8867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g01285 785 MobiDBLite consensus disorder prediction 69 103 - -
Bda06g01285 785 PANTHER PROTEIN PHOSPHATASE 2C 29 394 783 - -
Bda06g01285 785 Pfam Protein phosphatase 2C 572 724 IPR001932 -
Bda06g01285 785 PANTHER PROTEIN PHOSPHATASE 2C 25 337 IPR015655 GO:0004722|GO:0006470
Bda06g01285 785 PANTHER PROTEIN PHOSPHATASE 2C 394 783 IPR015655 GO:0004722|GO:0006470
Bda06g01285 785 Gene3D - 250 780 IPR036457 -
Bda06g01285 785 CDD PP2Cc 451 773 IPR001932 -
Bda06g01285 785 PANTHER PROTEIN PHOSPHATASE 2C 29 25 337 - -
Bda06g01285 785 MobiDBLite consensus disorder prediction 528 547 - -
Bda06g01285 785 SUPERFAMILY PP2C-like 272 774 IPR036457 -
Bda06g01285 785 SMART PP2C_4 260 771 IPR001932 -
Bda06g01285 785 ProSiteProfiles PPM-type phosphatase domain profile. 261 773 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00820 Bda-Chr2:48798373 Bda06g01285 Bda-Chr6:43426806 8.00E-174 dispersed
Bda03g00781 Bda-Chr3:6534109 Bda06g01285 Bda-Chr6:43426806 5.86E-134 dispersed
Bda06g01285 Bda-Chr6:43426806 Bda08g00622 Bda-Chr8:6381269 0 dispersed
Bda06g01276 Bda-Chr6:43367904 Bda06g01285 Bda-Chr6:43426806 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g01285 - - mnt:21406070 1016.53