Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda06g01305 ATGACCCAAGAATCAAATCTAGCCCACTCTCCGACGCTACCCTCACTCTACCATCTCCGCTATTCCAGTCCTTCAGCTCCAGACCCTTCTTCTTCTTCTTCTTCTTCAGCATCTCTGCTGTTTTCTTCTTTATTTGCGTTTCCTTCTATTTCAAATTCGCTGGTTATAAGAATTTTTCGCCAGTTGTGCTGTCCGCAGTTGCTGCGAATCCATTTTCGCTTCTTCATCCTCCTTTCACTTCCTATTGTCTACATCTTAATCTCTACCTCTCGCCGCTCTTCCGTCCAAAATTTATTTGTCGTACTTTCATTCTCTGTTGCACTTTTACTTTCTCTGAATCTTACCCTTTCTCGCCTACCCTCTATTCGCCTATTTATAGCTCGCTCCTTCCCTATCAATCTTTTCAGATCTTCTTCCTCCTCAAAGCCTCCCCAGCCTGTTATTTGGTCGATTGGGTCAAAACCCAAATTGGAAAGAAAGCAAAATTCAGGATCCTGGGTTCAAGTATACAGTAACGGGGACGTTTATGAGGGCGAAGTTCACAAAGGGAAAAGCTCAGGAAGCGGGGTTTATCACTATCACATGAGTGGAAGATATGAGGGCGATTGGATTGACCAGAAATACGATGGCTACGGCGTGGAGACGTGGGCGAAGGGAAGCCGGTATAGAGGACAGTACCGGCAAGGATTGAGACATGGGATTGGAGTTTACAGGTTTTTCACCGGCGATGTGTATGCAGGGGCGTGGTCTCATGGGCAGTGTCATGGGTGTGGAGTTCATACTTGTGAGGATGGGAGCAAGTATGCTGGGGAGTTTAAGAATGGCCTTAAACATGGTCTTGGCCACTACCATTTCAGGTATATATATGAAGTTTTTTCCATTTTTGAAACTGTAGGCAGTCCCATGTCCTATCTAAAGATTTTGAAAATTATGATAAGTTTATATAATGTTGAATATTGCAGAAATGGTGACAAATATGCGGGAGAATATTTCCAGGAAGCACGAAGGGCTGCGCAGAAAGCACATGATGTGTGTCGGGTGGATGAGTTGGTGAACAAAGCAATGACAACAGCCAACAAAGCAGCAAATGCAGCTAGAGTAGCAGCTATTAAGGCTGTCCAAAATCAAATGCATCGGATCGACACTGTCGAAGACAAACCAATTCTTCTCGTCTGA 1176 44.47 MTQESNLAHSPTLPSLYHLRYSSPSAPDPSSSSSSSASLLFSSLFAFPSISNSLVIRIFRQLCCPQLLRIHFRFFILLSLPIVYILISTSRRSSVQNLFVVLSFSVALLLSLNLTLSRLPSIRLFIARSFPINLFRSSSSSKPPQPVIWSIGSKPKLERKQNSGSWVQVYSNGDVYEGEVHKGKSSGSGVYHYHMSGRYEGDWIDQKYDGYGVETWAKGSRYRGQYRQGLRHGIGVYRFFTGDVYAGAWSHGQCHGCGVHTCEDGSKYAGEFKNGLKHGLGHYHFRYIYEVFSIFETVGSPMSYLKILKIMISLYNVEYCRNGDKYAGEYFQEARRAAQKAHDVCRVDELVNKAMTTANKAANAARVAAIKAVQNQMHRIDTVEDKPILLV 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 43725635 43728993 - Bda023159.1 Bda06g01305 8887

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda06g01305 391 PANTHER - 332 381 - -
Bda06g01305 391 Gene3D - 206 251 - -
Bda06g01305 391 Gene3D - 252 291 - -
Bda06g01305 391 Gene3D - 157 205 - -
Bda06g01305 391 Pfam MORN repeat 245 266 IPR003409 -
Bda06g01305 391 Pfam MORN repeat 222 244 IPR003409 -
Bda06g01305 391 Pfam MORN repeat 199 221 IPR003409 -
Bda06g01305 391 Pfam MORN repeat 176 194 IPR003409 -
Bda06g01305 391 Pfam MORN repeat 268 285 IPR003409 -
Bda06g01305 391 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 3 286 - -
Bda06g01305 391 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 332 381 - -
Bda06g01305 391 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 170 285 - -
Bda06g01305 391 SMART morn 197 218 IPR003409 -
Bda06g01305 391 SMART morn 266 287 IPR003409 -
Bda06g01305 391 SMART morn 220 241 IPR003409 -
Bda06g01305 391 SMART morn 174 195 IPR003409 -
Bda06g01305 391 SMART morn 243 264 IPR003409 -
Bda06g01305 391 PANTHER - 3 286 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda06g01305 - - - zju:107430419 383.259
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g01305 Bda-Chr6:43725635 Bda08g00046 Bda-Chr8:347422 1.05E-122 dispersed
Bda06g01305 Bda-Chr6:43725635 Bda03g01145 Bda-Chr3:12319410 1.61E-124 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g571 . Blo03g00134 Bda06g01305 . . Bpe07g00201 . . Cmo06g00849 Cmo16g01146 . . . . Sed05g2359 Cpe14g00907 . Bhi11g00093 Tan01g2116 Cmetu06g0894 . Hepe06g1074 Mch10g1606 . Cla10g00203 Cam10g0209 Cec10g0214 Cco10g0215 Clacu10g0212 Cmu10g1055 Cre10g0463 . . Cone6ag0628 Cone9ag0631 Lsi07g01244 . . Cme06g02515 . . . . . . . Bma12g00195 . . Cmo19g00513 Cma06g00826 Cma16g01097 . Car16g01039 . . . . . . . . . . . . . . . . . Csa03g00218 Chy06g02102 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010482 1 1 0 1 1 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 1 1 0 32
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda06g01305 Bda_Chr06 FPKM 13.921787 15.418659 30.316828 30.28117 68.333107 59.548252 68.116905 33.201836 41.189079