Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00010 ATGTCATCCTCTTCTACTCCTACCTTGACTCAGCTGGACCACCTTCCTCCCTCGGAGCAGCTCTGCTACGTCCATTGCAACATATGTGACACTGTCTTAGCGGTGAGCGTTCCTTGCACCAGTTTGTTCAAGACTGTGACAGTTCGATGCGGCCATTGCACCAATCTCCTGCCAGGTCTTCTTCTTCCTTCCAACAACCAGTTTCACCAGCTGAGCCACCCTCTCTTTTCACCCTCCCATAACTTTCTGGAAGAGATTCCCAATGTAACTCCAAATTTTCTGATCAACCAGAGCATTGCAAATGATTTTGTCATGCCCTCTCGAGGGGTTATGAACGAGCTTCCAAGACCTCCAGCTATAAACAGACCTCCAGAAAAAAGACAGAGAGTCCCTTCTGCATATAATCGCTTCATCAAGGATGAGATTCAACGCATCAAGTCTGTGAATCCAGATATATCACACAGAGAAGCGTTCAGCGCGGCTGCTAAAAATTGGGCCCACTTTCCACACATTCACTTTGGTCTCATGCCCGACCAGACAATGAAGAAGACAACCATGCGCCAACAGGAAGGAGATGATGTTTTGATGAAAGACGGGTTTTTCGCTGCAGCAAATGTGGGTATGTCCCACTTTTGA 636 47.48 MSSSSTPTLTQLDHLPPSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCGHCTNLLPGLLLPSNNQFHQLSHPLFSPSHNFLEEIPNVTPNFLINQSIANDFVMPSRGVMNELPRPPAINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNWAHFPHIHFGLMPDQTMKKTTMRQQEGDDVLMKDGFFAAANVGMSHF 211
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 155652 157942 - Bda025057.1 Bda07g00010 8900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00010 211 PANTHER PROTEIN YABBY 4 1 209 - -
Bda07g00010 211 SUPERFAMILY HMG-box 120 168 IPR036910 -
Bda07g00010 211 Pfam YABBY protein 17 175 IPR006780 GO:0007275
Bda07g00010 211 Gene3D High mobility group box domain 118 185 IPR036910 -
Bda07g00010 211 PANTHER PROTEIN YABBY 6-RELATED 1 209 IPR006780 GO:0007275
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00039 Bda07g00010 CCT
Bda07g00010 Bda08g00564 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00039 Bda-Chr6:403357 Bda07g00010 Bda-Chr7:155652 9.28E-98 dispersed
Bda07g00010 Bda-Chr7:155652 Bda08g00059 Bda-Chr8:474375 2.92E-58 dispersed
Bda07g00010 Bda-Chr7:155652 Bda08g00564 Bda-Chr8:5726069 5.15E-109 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16068 PF04690 YABBY 2.90E-65 CL0114 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00010 K25796 - jre:109011373 347.051