Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00039 ATGGTGATGGAGTTGATGAGGAGGGACGCCATTGAAGATGTACTCGTAATTGGGGGTTTGATCGGAGCTCAGATTGTATATGCAGGGAACTCTGTGCTTTTGAGTTATCTTATGGCTTTGGGCCTCAACCCTCTCTCCATTGTCGTCTTCTCTTCCTTCGCCACTTTTCTTATAGTTTCCCCCTTCGCTGTTTATTTAGAAAGGAGCAAATGGCCTCAGAAACTGGGTTTCAAATTGCTGGTTCAGCTGGTTCTGCTAGCGTTAGGAGGGGTAACTTTATTCCAATCTCTAATGCTTAAGGGCATAAACCTTACTTCGCCTGCCATGGCTACTGCTATGACAAGCCTTTCTCCTGGACTCATCTTCATCATTGCTTGGGCATTTAGATTAGAGAAAGTGAAGCTCAATTGCAGTTACAGTAGAGCTAAAATCGCAGGGACAGTGTTGTGTGTAGTAGGGGCTCTCACGATGAGCTTAGTTCATAGCCAAGCCACTGAACCAGAAAGAGAGGCTTCCCAATTTTCTTCTCAACATTATGAAATCTTTGATAGGCAAAAGGTCATTGGCTGCTTCTGTCTCTTTCTTGGAGTCTTGATTCTGTCTTTCACCATTGTTTTGCAGGCATCGACTCTCAAAGATTTTCCCGCTCCGTTGTCTATGTGCTCGTTGACATCCTTCATCGGTGCGATCACGACTTGTAGCCTCCAGCTTTTTGAAGATCGGAGGGTTGATATGGGTTGGGCAAGGATGAGTATTGGAAACTTGATTGGCTTTTACCTACTGTTTGACGAACAGGTTGGGGCCGTGAATGGTGGGATCATGAGTTTCAACGGGTGGGCGATAAAGAAGAGAGGGCCGGTCATGCAGTCGGTTTTTAATCCAATTGGAGCAGTTTGCTCCATCATTCTATCAATGTTCACCATGGGAGATACCATTAAAATTGGAAGCCTTGTCGGCATGTTCGTCTTGTTCTCGGGATTTTACTTGGTGCTTTGGGCAAAAGGGAAGGAAGGTCTTTCCAAGGGAGATGGCTTGGAGGGAGAGATAGACGAAGAGACGCCTCTCCTAAGTTAA 1074 45.72 MVMELMRRDAIEDVLVIGGLIGAQIVYAGNSVLLSYLMALGLNPLSIVVFSSFATFLIVSPFAVYLERSKWPQKLGFKLLVQLVLLALGGVTLFQSLMLKGINLTSPAMATAMTSLSPGLIFIIAWAFRLEKVKLNCSYSRAKIAGTVLCVVGALTMSLVHSQATEPEREASQFSSQHYEIFDRQKVIGCFCLFLGVLILSFTIVLQASTLKDFPAPLSMCSLTSFIGAITTCSLQLFEDRRVDMGWARMSIGNLIGFYLLFDEQVGAVNGGIMSFNGWAIKKRGPVMQSVFNPIGAVCSIILSMFTMGDTIKIGSLVGMFVLFSGFYLVLWAKGKEGLSKGDGLEGEIDEETPLLS 357
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 695078 696729 - Bda025099.1 Bda07g00039 8929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00039 357 Pfam EamA-like transporter family 20 158 IPR000620 GO:0016020|GO:0016021
Bda07g00039 357 PANTHER WAT1-RELATED PROTEIN 14 357 IPR030184 GO:0016021|GO:0022857
Bda07g00039 357 PANTHER OS11G0588100 PROTEIN 14 357 - -
Bda07g00039 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 267 335 - -
Bda07g00039 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 159 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00039 Bda-Chr7:695078 Bda08g00585 Bda-Chr8:5960587 2.16E-141 dispersed
Bda07g00039 Bda-Chr7:695078 Bda01g00511 Bda-Chr1:32098394 5.34E-40 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00039 - - qsu:112028067 431.795