Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00057 ATGGGCAACCGCGAGATGGATAAAACAACTAAAGAGGAGTTGAAGACAACGCCTGCTTCCACGCAGGAACAATCCCCAACTACGAGCAGTGGTGCAGTTAATCCTGACTGGTCAGGATTTCAGGCTTATTCTCCTATGCCACCTCATGGGTTCTTGGCATCCAGTCCTCAAGCTCATCCATATATGTGGGGGGTTCAGCATATAATGCCTCCTTATGGCACTCCTCCCTATGTTGCTATGTATCCCCACGGTGGCATATATGCTCATCCATCTATTCCTCCGGGTCCATATCCTTTTAGTCCTTTTGCTGCTCCTTCTCCAAATGGCATCACTGAAGCTTCTGGAAATACACAGGGTGGATTGGATACAGATGTCAAACACCCGGATGCAAAGGAAAAGTTACCCATTAAAAGATCGAAAGGAAGCCTGGGAAGTTTGAATATGATTACTGGGAAGAATAATGAGATTGGTAAAATGTCAGGAGCAGCTGCTAATGGCATATATTCTAAAAGTGCTGAAAGTGCAAGTGAAGGTACGAGCGACGGAAGCGATGACAATTCTGACAATGTAATCGTGGCCAAGACTCCTCGGAAGGTTGTTATGTTCTATATTATTAACCTTCAACTTAAACATTATTCATTTATTGACAACAGTTTTGTCTTTGTTTCTGTTTTTACAGCCGCGACATTTCAAAATGGCAGTTCTGTGCATGGTGCTAAAAATGGAGGACCAAATGCAACTTCAATGGCGAATCAGTCGATGACCATCATACCAGCTGCTGGAGTACCTGGGTCTGTAACTGGTCCCACTACTATCTTAAACATAGGAATGGACTATTGGGGGGCTCCAACTTCTTCCGCGATCCCTCCTGCCTTGAAGGCAAATCCAGTTGCTACTGGATCACGGGATCAGTCTCAGCATTGGTTGCAGGATGAGCGAGAGCAAAAGCGACAGAGACGGAAACAATCAAACCGAGAATCTGCTCGTCGATCGCGACTGCGGAAGCAGGCGGAATGTGACGAACTGGCTCAACGAGCTGAAGTACTGAAAGATGAAAATGCCAACCTCAGATCCGAAGTGAATCGAATCAGAAGCGAGTATGAGCAACTTCTCTTGGAGAATTCCTCACTCAAGGTATCAGAACATCTCTGTTTGTTCAAAACTTTACCTTGA 1173 45.35 MGNREMDKTTKEELKTTPASTQEQSPTTSSGAVNPDWSGFQAYSPMPPHGFLASSPQAHPYMWGVQHIMPPYGTPPYVAMYPHGGIYAHPSIPPGPYPFSPFAAPSPNGITEASGNTQGGLDTDVKHPDAKEKLPIKRSKGSLGSLNMITGKNNEIGKMSGAAANGIYSKSAESASEGTSDGSDDNSDNVIVAKTPRKVVMFYIINLQLKHYSFIDNSFVFVSVFTAATFQNGSSVHGAKNGGPNATSMANQSMTIIPAAGVPGSVTGPTTILNIGMDYWGAPTSSAIPPALKANPVATGSRDQSQHWLQDEREQKRQRRKQSNRESARRSRLRKQAECDELAQRAEVLKDENANLRSEVNRIRSEYEQLLLENSSLKVSEHLCLFKTLP 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 849594 853911 - Bda025114.1 Bda07g00057 8947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00057 390 MobiDBLite consensus disorder prediction 1 40 - -
Bda07g00057 390 CDD bZIP_plant_GBF1 317 367 IPR045314 GO:0003700|GO:0006355
Bda07g00057 390 SMART brlzneu 312 376 IPR004827 GO:0003700|GO:0006355
Bda07g00057 390 PANTHER BZIP TRANSCRIPTION FACTOR 68 229 379 - -
Bda07g00057 390 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 314 377 IPR004827 GO:0003700|GO:0006355
Bda07g00057 390 Pfam Disordered region downstream of MFMR 228 289 - -
Bda07g00057 390 Pfam Disordered region downstream of MFMR 132 193 - -
Bda07g00057 390 Coils Coil 332 373 - -
Bda07g00057 390 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 191 IPR044827 GO:0003700|GO:0006355|GO:0043565
Bda07g00057 390 PANTHER BZIP TRANSCRIPTION FACTOR 68 1 191 - -
Bda07g00057 390 Gene3D - 314 378 - -
Bda07g00057 390 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 319 334 IPR004827 GO:0003700|GO:0006355
Bda07g00057 390 PANTHER G-BOX-BINDING FACTOR 3-RELATED 229 379 IPR044827 GO:0003700|GO:0006355|GO:0043565
Bda07g00057 390 SUPERFAMILY Leucine zipper domain 316 370 IPR046347 GO:0003700|GO:0006355
Bda07g00057 390 MobiDBLite consensus disorder prediction 290 337 - -
Bda07g00057 390 Pfam G-box binding protein MFMR 1 93 IPR012900 -
Bda07g00057 390 MobiDBLite consensus disorder prediction 15 37 - -
Bda07g00057 390 MobiDBLite consensus disorder prediction 306 321 - -
Bda07g00057 390 Pfam bZIP transcription factor 312 374 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00063 Bda-Chr4:1031813 Bda07g00057 Bda-Chr7:849594 6.51E-62 dispersed
Bda05g01178 Bda-Chr5:59787603 Bda07g00057 Bda-Chr7:849594 1.58E-09 dispersed
Bda07g00057 Bda-Chr7:849594 Bda11g00226 Bda-Chr11:2763032 3.15E-30 dispersed
Bda07g00057 Bda-Chr7:849594 Bda10g00121 Bda-Chr10:3166845 2.38E-56 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16073 PF07777 MFMR 7.70E-32 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00057 K09060 - fve:101292506 456.062