Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda07g00099 | ATGACGGACTATGGATTATCAACGACGGCGATGAATCTATGGCCGGACGAGAATGGGTCGGTGATGGACGCCTTCTTGAATTCTGATCTTTCTTCTTTCTGGGCTCCGCCACCTCAGAACCAGCCTTCCTCCGCCTCTACATCTGCTCCTCTCTCCCAATCCCAGCCGTCTGCAGTGGTTTTCTCCCAGGAGAGCTTGCAGCAACGTCTGCAGGCGGTGATCGAGGGAGCTCGCGAGAGCTGGACGTACGCGATATTCTGGCAGCCCTCTTACGATTACTCCGGCCCGTCGATTTTAGGGTGGGGTGATGGGTATTACAAAGGGGATGAAGGAAAGGGAGCGGCCAGACCCAATGCTCCCACTTCTGCTGCGGAGCAGGAGCACCGGAGAAAAGTTCTTCGGGAGCTCAACTCACTGATTTCAGGCTCCGCCGCCGCTGCAGACGACCCTGTCGATGAAGTCGTCACCGACACCGAGTGGTTCTTCTTGGTTTCGATGACCCAATCTTTCGTCAACGGCAGTGGATTGCCCGGTCAGGCTTTGCTCAGTTCCCGACCGGTGTGGGTTTCAGGCCCTGACCGACTGGCGACGTCTACCTGCGAACGGGCTAGGCAGGCTCAGGCCTTCGGGTTGCAGACGATGGTATGTATACCCTCTCCTAACGGAGTGGTTGAATTGGGGTCGACGGAGGTCATTTTGCAGAGCGCCGATCTGACGAATAAAGTAAGGGTTTTGTTCAATTTCAACAATCTGGAAGTTGGTTCTTGGCCCTTGGACAGTGCTGACCAAGCTGAAATGGACCCATCTTCTCTCTGGCTGAACGATCCATCTGAAATTAAGGAACCGGCGAGCTCAATCCCATCTTCAATGGCTCCGGCCTCAACTACACAGGAAGCTTCAAAGCCAATCCACATCGAAAATCGAAGGTCATCGGAGAATCCATCCAACCTACAATCGCCTCGGATGCAGACGCAGACCTTCTTCGCCAAAGAATTAAATTTCTCCAGCTACGGATGCAAGCCGGAATCCGGCGAGATTCTCAACTTTGGTGAAAGTAAAAGGAGTTCTTATGAAAACGGCAGCTTGTTCTCCGGCCATTCTCAGATCATTCCTGAGGATCCCGTGAAGAAGAGATCGCCTGGTTCTCGGGGAAGTAACGACGATGGGATGCTGTCGTTTACTTCCGGTGTGATTTTGCCATCTTCCGGCGTGAAATCAAGTGGATGCGCACTGGAATCAGACCATTCCGATCTCGAAGCTTCAGTGGTTCGTGAAGCAGACAGTAGCAGAGTAGTAGAACCAGAGAAGAAGCCTCGAAAACGAGGAAGAAAACCAGCAAACGGAAGAGAAGAGCCATTAAATCACGTCGAAGCAGAACGACAGAGAAGAGAGAAGCTAAACCAAAGATTCTACGCTCTCAGAGCTGTAGTTCCAAACGTGTCGAAAATGGACAAAGCTTCCCTTCTCGGCGACGCCATTTCTTACATCAACGAGCTCAAATCCAAGCTTCAAACTTCAGAATCAGAAAACGAAGAATTGCAGGCACAGTTAAATTCATCGAAAAAAGATTTGGCCAGCAAAGAAAATCGCTACACAGGATCAAAACAAGATCAAGAACAGAAGATATCAAATCAAAATGGAGGTAAACTGTCCGAAATGGACATTGATGTAAAAATTCTGGGTTGCGACGCCATGATCCGAATTCAATGCAGTAAGAAAAACCATCCAGCTGCTACGTTAATGGCAGCTCTAAAGGAATTACACTTGGAAGTTCACCATGCGAGCATGTCAGTAGTGAATAACTTGATGATCCAACAAGCGACAGTGAAGATGGGGAGTAGATTTTACACTCAAGAACAGCTCAAAAATGCTCTGTCGTCAAAATTAAGCGATACCCGATGA | 1902 | 49.58 | MTDYGLSTTAMNLWPDENGSVMDAFLNSDLSSFWAPPPQNQPSSASTSAPLSQSQPSAVVFSQESLQQRLQAVIEGARESWTYAIFWQPSYDYSGPSILGWGDGYYKGDEGKGAARPNAPTSAAEQEHRRKVLRELNSLISGSAAAADDPVDEVVTDTEWFFLVSMTQSFVNGSGLPGQALLSSRPVWVSGPDRLATSTCERARQAQAFGLQTMVCIPSPNGVVELGSTEVILQSADLTNKVRVLFNFNNLEVGSWPLDSADQAEMDPSSLWLNDPSEIKEPASSIPSSMAPASTTQEASKPIHIENRRSSENPSNLQSPRMQTQTFFAKELNFSSYGCKPESGEILNFGESKRSSYENGSLFSGHSQIIPEDPVKKRSPGSRGSNDDGMLSFTSGVILPSSGVKSSGCALESDHSDLEASVVREADSSRVVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELKSKLQTSESENEELQAQLNSSKKDLASKENRYTGSKQDQEQKISNQNGGKLSEMDIDVKILGCDAMIRIQCSKKNHPAATLMAALKELHLEVHHASMSVVNNLMIQQATVKMGSRFYTQEQLKNALSSKLSDTR | 633 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 1167675 | 1169576 | + | Bda025157.1 | Bda07g00099 | 8989 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda07g00099 | 633 | Pfam | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 66 | 246 | IPR025610 | - | |
Bda07g00099 | 633 | PANTHER | MYC | 44 | 630 | IPR045084 | GO:0003700|GO:0006355 | |
Bda07g00099 | 633 | MobiDBLite | consensus disorder prediction | 420 | 460 | - | - | |
Bda07g00099 | 633 | MobiDBLite | consensus disorder prediction | 281 | 301 | - | - | |
Bda07g00099 | 633 | PANTHER | TRANSCRIPTION FACTOR MYC2 | 44 | 630 | - | - | |
Bda07g00099 | 633 | MobiDBLite | consensus disorder prediction | 507 | 522 | - | - | |
Bda07g00099 | 633 | MobiDBLite | consensus disorder prediction | 355 | 394 | - | - | |
Bda07g00099 | 633 | SMART | finulus | 456 | 505 | IPR011598 | GO:0046983 | |
Bda07g00099 | 633 | Coils | Coil | 496 | 530 | - | - | |
Bda07g00099 | 633 | MobiDBLite | consensus disorder prediction | 267 | 320 | - | - | |
Bda07g00099 | 633 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 450 | 499 | IPR011598 | GO:0046983 | |
Bda07g00099 | 633 | Pfam | Helix-loop-helix DNA-binding domain | 454 | 499 | IPR011598 | GO:0046983 | |
Bda07g00099 | 633 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 453 | 518 | IPR036638 | GO:0046983 | |
Bda07g00099 | 633 | MobiDBLite | consensus disorder prediction | 507 | 547 | - | - | |
Bda07g00099 | 633 | CDD | bHLH_AtAIB_like | 447 | 522 | - | - | |
Bda07g00099 | 633 | Gene3D | - | 442 | 530 | IPR036638 | GO:0046983 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda07g00099 | Bda09g00724 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda04g00147 | Bda-Chr4:4033405 | Bda07g00099 | Bda-Chr7:1167675 | 1.96E-20 | dispersed | |
Bda07g00099 | Bda-Chr7:1167675 | Bda11g00209 | Bda-Chr11:2624274 | 1.82E-29 | dispersed | |
Bda08g00515 | Bda-Chr8:5197591 | Bda07g00099 | Bda-Chr7:1167675 | 1.23E-15 | dispersed | |
Bda10g00030 | Bda-Chr10:598516 | Bda07g00099 | Bda-Chr7:1167675 | 2.25E-18 | dispersed | |
Bda11g01542 | Bda-Chr11:47840500 | Bda07g00099 | Bda-Chr7:1167675 | 9.73E-17 | dispersed | |
Bda12g00887 | Bda-Chr12:39604560 | Bda07g00099 | Bda-Chr7:1167675 | 1.41E-07 | dispersed | |
Bda13g00632 | Bda-Chr13:7301859 | Bda07g00099 | Bda-Chr7:1167675 | 3.91E-09 | dispersed | |
Bda08g00086 | Bda-Chr8:786604 | Bda07g00099 | Bda-Chr7:1167675 | 1.41E-18 | transposed | |
Bda10g00040 | Bda-Chr10:918409 | Bda07g00099 | Bda-Chr7:1167675 | 1.08E-13 | transposed | |
Bda07g00099 | Bda-Chr7:1167675 | Bda09g00724 | Bda-Chr9:12230570 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16078 | PF14215 | bHLH-MYC_N | 2.60E-54 | CL0161 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda07g00099 | K13422 | - | vvi:100250607 | 810.061 |