Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00099 ATGACGGACTATGGATTATCAACGACGGCGATGAATCTATGGCCGGACGAGAATGGGTCGGTGATGGACGCCTTCTTGAATTCTGATCTTTCTTCTTTCTGGGCTCCGCCACCTCAGAACCAGCCTTCCTCCGCCTCTACATCTGCTCCTCTCTCCCAATCCCAGCCGTCTGCAGTGGTTTTCTCCCAGGAGAGCTTGCAGCAACGTCTGCAGGCGGTGATCGAGGGAGCTCGCGAGAGCTGGACGTACGCGATATTCTGGCAGCCCTCTTACGATTACTCCGGCCCGTCGATTTTAGGGTGGGGTGATGGGTATTACAAAGGGGATGAAGGAAAGGGAGCGGCCAGACCCAATGCTCCCACTTCTGCTGCGGAGCAGGAGCACCGGAGAAAAGTTCTTCGGGAGCTCAACTCACTGATTTCAGGCTCCGCCGCCGCTGCAGACGACCCTGTCGATGAAGTCGTCACCGACACCGAGTGGTTCTTCTTGGTTTCGATGACCCAATCTTTCGTCAACGGCAGTGGATTGCCCGGTCAGGCTTTGCTCAGTTCCCGACCGGTGTGGGTTTCAGGCCCTGACCGACTGGCGACGTCTACCTGCGAACGGGCTAGGCAGGCTCAGGCCTTCGGGTTGCAGACGATGGTATGTATACCCTCTCCTAACGGAGTGGTTGAATTGGGGTCGACGGAGGTCATTTTGCAGAGCGCCGATCTGACGAATAAAGTAAGGGTTTTGTTCAATTTCAACAATCTGGAAGTTGGTTCTTGGCCCTTGGACAGTGCTGACCAAGCTGAAATGGACCCATCTTCTCTCTGGCTGAACGATCCATCTGAAATTAAGGAACCGGCGAGCTCAATCCCATCTTCAATGGCTCCGGCCTCAACTACACAGGAAGCTTCAAAGCCAATCCACATCGAAAATCGAAGGTCATCGGAGAATCCATCCAACCTACAATCGCCTCGGATGCAGACGCAGACCTTCTTCGCCAAAGAATTAAATTTCTCCAGCTACGGATGCAAGCCGGAATCCGGCGAGATTCTCAACTTTGGTGAAAGTAAAAGGAGTTCTTATGAAAACGGCAGCTTGTTCTCCGGCCATTCTCAGATCATTCCTGAGGATCCCGTGAAGAAGAGATCGCCTGGTTCTCGGGGAAGTAACGACGATGGGATGCTGTCGTTTACTTCCGGTGTGATTTTGCCATCTTCCGGCGTGAAATCAAGTGGATGCGCACTGGAATCAGACCATTCCGATCTCGAAGCTTCAGTGGTTCGTGAAGCAGACAGTAGCAGAGTAGTAGAACCAGAGAAGAAGCCTCGAAAACGAGGAAGAAAACCAGCAAACGGAAGAGAAGAGCCATTAAATCACGTCGAAGCAGAACGACAGAGAAGAGAGAAGCTAAACCAAAGATTCTACGCTCTCAGAGCTGTAGTTCCAAACGTGTCGAAAATGGACAAAGCTTCCCTTCTCGGCGACGCCATTTCTTACATCAACGAGCTCAAATCCAAGCTTCAAACTTCAGAATCAGAAAACGAAGAATTGCAGGCACAGTTAAATTCATCGAAAAAAGATTTGGCCAGCAAAGAAAATCGCTACACAGGATCAAAACAAGATCAAGAACAGAAGATATCAAATCAAAATGGAGGTAAACTGTCCGAAATGGACATTGATGTAAAAATTCTGGGTTGCGACGCCATGATCCGAATTCAATGCAGTAAGAAAAACCATCCAGCTGCTACGTTAATGGCAGCTCTAAAGGAATTACACTTGGAAGTTCACCATGCGAGCATGTCAGTAGTGAATAACTTGATGATCCAACAAGCGACAGTGAAGATGGGGAGTAGATTTTACACTCAAGAACAGCTCAAAAATGCTCTGTCGTCAAAATTAAGCGATACCCGATGA 1902 49.58 MTDYGLSTTAMNLWPDENGSVMDAFLNSDLSSFWAPPPQNQPSSASTSAPLSQSQPSAVVFSQESLQQRLQAVIEGARESWTYAIFWQPSYDYSGPSILGWGDGYYKGDEGKGAARPNAPTSAAEQEHRRKVLRELNSLISGSAAAADDPVDEVVTDTEWFFLVSMTQSFVNGSGLPGQALLSSRPVWVSGPDRLATSTCERARQAQAFGLQTMVCIPSPNGVVELGSTEVILQSADLTNKVRVLFNFNNLEVGSWPLDSADQAEMDPSSLWLNDPSEIKEPASSIPSSMAPASTTQEASKPIHIENRRSSENPSNLQSPRMQTQTFFAKELNFSSYGCKPESGEILNFGESKRSSYENGSLFSGHSQIIPEDPVKKRSPGSRGSNDDGMLSFTSGVILPSSGVKSSGCALESDHSDLEASVVREADSSRVVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELKSKLQTSESENEELQAQLNSSKKDLASKENRYTGSKQDQEQKISNQNGGKLSEMDIDVKILGCDAMIRIQCSKKNHPAATLMAALKELHLEVHHASMSVVNNLMIQQATVKMGSRFYTQEQLKNALSSKLSDTR 633
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1167675 1169576 + Bda025157.1 Bda07g00099 8989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00099 633 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 66 246 IPR025610 -
Bda07g00099 633 PANTHER MYC 44 630 IPR045084 GO:0003700|GO:0006355
Bda07g00099 633 MobiDBLite consensus disorder prediction 420 460 - -
Bda07g00099 633 MobiDBLite consensus disorder prediction 281 301 - -
Bda07g00099 633 PANTHER TRANSCRIPTION FACTOR MYC2 44 630 - -
Bda07g00099 633 MobiDBLite consensus disorder prediction 507 522 - -
Bda07g00099 633 MobiDBLite consensus disorder prediction 355 394 - -
Bda07g00099 633 SMART finulus 456 505 IPR011598 GO:0046983
Bda07g00099 633 Coils Coil 496 530 - -
Bda07g00099 633 MobiDBLite consensus disorder prediction 267 320 - -
Bda07g00099 633 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 450 499 IPR011598 GO:0046983
Bda07g00099 633 Pfam Helix-loop-helix DNA-binding domain 454 499 IPR011598 GO:0046983
Bda07g00099 633 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 453 518 IPR036638 GO:0046983
Bda07g00099 633 MobiDBLite consensus disorder prediction 507 547 - -
Bda07g00099 633 CDD bHLH_AtAIB_like 447 522 - -
Bda07g00099 633 Gene3D - 442 530 IPR036638 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda07g00099 Bda09g00724 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00147 Bda-Chr4:4033405 Bda07g00099 Bda-Chr7:1167675 1.96E-20 dispersed
Bda07g00099 Bda-Chr7:1167675 Bda11g00209 Bda-Chr11:2624274 1.82E-29 dispersed
Bda08g00515 Bda-Chr8:5197591 Bda07g00099 Bda-Chr7:1167675 1.23E-15 dispersed
Bda10g00030 Bda-Chr10:598516 Bda07g00099 Bda-Chr7:1167675 2.25E-18 dispersed
Bda11g01542 Bda-Chr11:47840500 Bda07g00099 Bda-Chr7:1167675 9.73E-17 dispersed
Bda12g00887 Bda-Chr12:39604560 Bda07g00099 Bda-Chr7:1167675 1.41E-07 dispersed
Bda13g00632 Bda-Chr13:7301859 Bda07g00099 Bda-Chr7:1167675 3.91E-09 dispersed
Bda08g00086 Bda-Chr8:786604 Bda07g00099 Bda-Chr7:1167675 1.41E-18 transposed
Bda10g00040 Bda-Chr10:918409 Bda07g00099 Bda-Chr7:1167675 1.08E-13 transposed
Bda07g00099 Bda-Chr7:1167675 Bda09g00724 Bda-Chr9:12230570 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16078 PF14215 bHLH-MYC_N 2.60E-54 CL0161 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00099 K13422 - vvi:100250607 810.061