Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00104 ATGGCTGGTTTGGATTTAGGCAATCGTTATGTTCATCCTCTTCACTTACCAGACTTGCACCTCCAAAGGCCTGTTCAGTCTCATCAACCTGCAAATTCTGAGGAAGATCTCAATCATGGCGCTCACTTTTCAGCTGACGATGGATCTCACCAAGGCCTAGACCTTGTCGGAGCTAACGCCGGTGATATTATTGGTCGCCGCCCTCGCGGGAGGCCTCCCGGCTCGAAAAATAAGCCTAAACCGCCGGTTATAATCACACGGGAGAGTGCCAATACTCTTCGAGCTCATATTCTCGAGGTTGGCAATGGCTGTGATGTGTTTGACTGTGTGTCTACCTACGCTCGCCGTAGGCAGCGGGGGATCTGCATCTTGAGCGGGAGCGGCACGGTGACTAATGTTAGCTTGAGACAACCGGCGGCGGCTGGTGCCGTCGTAACCCTACATGGGAGATTTGAGATACTATCGCTTTCTGGTTCGTTTTTGCCGCCTCCCGCTCCTCCGGGGGCCACGAGTCTGACGATATTTCTGGCCGGCGGTCAAGGGCAAGTGGTGGGTGGAAGTGTCGTTGGAGAGCTCACTGCAGCTGGGCCGGTAATCCTCATTGCCGCATCGTTTACTAATGTGGCCTATGAGAGACTTCCGCTGGACGAGGAGGAGAATCTGCCTGTGCAGCCGTCAGATTCTCCGGCGACTGGAAGTGGTAGTGGCGTAGGGAACAACCCATTTCCGGATCCTTCTTCTGGACTTCCTTTCTACAATCTGCCGCTTAATTTACAGAACGTTCAGCTTCCCGGCGATGGTTGGGCAAATAATTCAGTATCTCGTCCTCCATTCTGA 837 53.52 MAGLDLGNRYVHPLHLPDLHLQRPVQSHQPANSEEDLNHGAHFSADDGSHQGLDLVGANAGDIIGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVGNGCDVFDCVSTYARRRQRGICILSGSGTVTNVSLRQPAAAGAVVTLHGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGSVVGELTAAGPVILIAASFTNVAYERLPLDEEENLPVQPSDSPATGSGSGVGNNPFPDPSSGLPFYNLPLNLQNVQLPGDGWANNSVSRPPF 278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1276687 1277523 - Bda025165.1 Bda07g00104 8994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00104 278 MobiDBLite consensus disorder prediction 224 242 - -
Bda07g00104 278 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 278 IPR014476 GO:0003680
Bda07g00104 278 Pfam Plants and Prokaryotes Conserved (PCC) domain 94 207 IPR005175 -
Bda07g00104 278 MobiDBLite consensus disorder prediction 218 248 - -
Bda07g00104 278 MobiDBLite consensus disorder prediction 24 83 - -
Bda07g00104 278 Gene3D - 93 225 - -
Bda07g00104 278 SUPERFAMILY AF0104/ALDC/Ptd012-like 90 222 - -
Bda07g00104 278 ProSiteProfiles PPC domain profile profile. 90 227 IPR005175 -
Bda07g00104 278 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 23 1 278 - -
Bda07g00104 278 CDD DUF296 94 177 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00104 Bda-Chr7:1276687 Bda11g00297 Bda-Chr11:3364528 4.17E-113 dispersed
Bda07g00104 Bda-Chr7:1276687 Bda09g00709 Bda-Chr9:11462237 1.38E-151 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00104 - - jre:108994023 397.127