Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00160 ATGGAAGCACAAAATTCTGAATCTGGGCATATAATTGAAGTATGTGGAGATTTACCTTCAGCCGACTCAAGCTTAAATGGAAGGAAGGTATGTGGTGAGGCGCCATGCGGATTTTCAGACGTGAAAAGCAGTTCAAAAGATGCAAAAGAACGATCAGCTTCGATGCGAAAACTTTGCATAGCAGTTGTGCTTTGTGTTGTATTTATGAGCGTAGAGGTTGTTGGAGGTGTTAAAGCGAACAGTCTTGCAATTTTGACTGACGCTGCCCATTTGCTGTCCGATGTGGCCGCCTTTGCAATTTCCCTGTTTTCCATTTGGGCGTCTGGGTGGGAGGCGACTCCTCGACAGTCTTATGGTTTCTTCCGAATTGAAATATTGGGTGCTCTTGTTTCGATTCAGATGATATGGCTTCTTGCCGGAATTCTTGTCTATGAGGCCATTGCTAGAATCATTAACGATACTGGTGAAGTAAAGGGCTTTCTGATGTTTGTGGTTTCTGCCTTCGGTCTAGTGGTTAATATAGCCATGGCTTTGCTACTCGGCCACAATCACAGCCATTCGCACGACCACGGTCACAACCATGGGCCCGGGGATCATGGGCATAGCCACGAGGATCACGACGAAAGGCATCGACATGGGATAAGTGTGACCACCACCCACCACCACCATGATGGCGGCTCAAAGAACAACGATAAGCATAAACATGAGAATCCGACTAAGCCCCTTCTCGATAAACCAAAGACTAGTCAGGACGAACCGAAGCAACAAAGAAACATCAACGTCCAAGGCGCATATCTACACGTGCTTGGAGACTCCATTCAAAGCATCGGAGTCTTGATTGGCGGGGCACTCATATGGTACAAGCCTGAGTGGAAGATAATCGATCTTATATGCACACTAATTTTTTCAGCAATAGTTTTGGGCACTACAATCCGAATGCTAAGGAACATTCTTGAGGTTCTTATGGAAAGCACTCCTCGAGAGATAGATGCAACGAAGCTCGAAAGGGGCCTGTGTGAGATCGACGAGGTGGTTGCCATCCACGAGCTGCATATTTGGGCAATCACGGTAGGAAAGGTACTCTTGGCCTGCCATGTTATAATCAAGCCTGATGCCGATGCAGATTTGGTGTTAGACAAAGTCATAGAATACATAAAAAGAGAATACAACATCAGCCATGTGACTATTCAGATAGAGCGCCAGTAG 1206 46.19 MEAQNSESGHIIEVCGDLPSADSSLNGRKVCGEAPCGFSDVKSSSKDAKERSASMRKLCIAVVLCVVFMSVEVVGGVKANSLAILTDAAHLLSDVAAFAISLFSIWASGWEATPRQSYGFFRIEILGALVSIQMIWLLAGILVYEAIARIINDTGEVKGFLMFVVSAFGLVVNIAMALLLGHNHSHSHDHGHNHGPGDHGHSHEDHDERHRHGISVTTTHHHHDGGSKNNDKHKHENPTKPLLDKPKTSQDEPKQQRNINVQGAYLHVLGDSIQSIGVLIGGALIWYKPEWKIIDLICTLIFSAIVLGTTIRMLRNILEVLMESTPREIDATKLERGLCEIDEVVAIHELHIWAITVGKVLLACHVIIKPDADADLVLDKVIEYIKREYNISHVTIQIERQ 401
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1977281 1978486 + Bda025228.1 Bda07g00160 9050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00160 401 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 1 400 - -
Bda07g00160 401 SUPERFAMILY Cation efflux protein transmembrane domain-like 52 323 IPR027469 -
Bda07g00160 401 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 328 399 IPR036837 -
Bda07g00160 401 Pfam Cation efflux family 59 322 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Bda07g00160 401 MobiDBLite consensus disorder prediction 185 255 - -
Bda07g00160 401 Gene3D Cation efflux protein transmembrane domain 54 321 IPR027469 -
Bda07g00160 401 MobiDBLite consensus disorder prediction 185 252 - -
Bda07g00160 401 PANTHER METAL TOLERANCE PROTEIN A1 1 400 - -
Bda07g00160 401 TIGRFAM CDF: cation diffusion facilitator family transporter 55 401 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda07g00160 Bda09g00629 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00160 Bda-Chr7:1977281 Bda09g00640 Bda-Chr9:9505696 0 dispersed
Bda01g01254 Bda-Chr1:47994302 Bda07g00160 Bda-Chr7:1977281 4.31E-39 transposed
Bda07g00567 Bda-Chr7:7027479 Bda07g00160 Bda-Chr7:1977281 1.80E-16 transposed
Bda07g00160 Bda-Chr7:1977281 Bda09g00629 Bda-Chr9:9255927 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00160 K14689 - qsu:112039309 605.905