Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00175 AGGAAAGAGGAGAGAATGCCGGAATCTGAGGGAGGTACGCCGACGGCATCGGCGCCGGCGACTCCGATATCGCCGGGAGGACCGCTAATTTCGTCGTTGCGAGTGGATTCGCTGTCGTATGATCGGAAGTCAATGCCGCGGTGCAAGTGCTTGCCTGTTAATGCTCCCACGTGGCAGTCTCCATCCTGCTTCACCGACTTCCCTTCGCCGGATGTTTCTCTCACTAGAAAGATAGGTGCAGAGTTTGTGGGGACATTCATCCTCATATTCGGGGCTACAGCCGCGCCAATTGTGAACCAAAAGTACCACGGGGCCGAGACCCTTATCGGCAACGCAGCCTCTGCAGGACTAGCTGTGATGATCGTTATCCTCTCGACCGGCCACATCTCCGGCGCCCACCTCAACCCAGCGCTCACTATCGCCTTTGCCGCTTTACGCCACTTCCCTTGGGTGCATGTTCCGGCTTACATTGCAGCCCAAGTTTCGGCCTCAATTTGTGCTTCCTTTGCTCTTAAAGGCGTCTTCCACCCGTATATGTCCGGCGGAGTTACCGTTCCGTCTGTCACCATCGGCCAGGCGTTTGCTATCGAACTCATCATCACTTTCAATCTCTTGTTTGTTGTTACTGCTGTGGCTACTGATACTCGAGCTGTGGGAGAGTTAGCAGGCATTGCAGTTGGTGCTACGGTCATGCTGAATATTCTAATAGCCGGGCCGTCAACCGGTGGTTCGATGAATCCGGTGCGGACGCTGGGGCCGGCAATCGCAGCTGGGAATTATCGAGGAATATGGTTGTACGTGGTTGCGCCGATCATCGGGGGTTTGGCTGGGTCTGGAATCTACACCGCCGTGAAGCTCAAAGACGACGGGACTGAGCCTCCTCGCCAGGTGAGGAGCTTCCGCCGCTAA 909 56.0 RKEERMPESEGGTPTASAPATPISPGGPLISSLRVDSLSYDRKSMPRCKCLPVNAPTWQSPSCFTDFPSPDVSLTRKIGAEFVGTFILIFGATAAPIVNQKYHGAETLIGNAASAGLAVMIVILSTGHISGAHLNPALTIAFAALRHFPWVHVPAYIAAQVSASICASFALKGVFHPYMSGGVTVPSVTIGQAFAIELIITFNLLFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAIAAGNYRGIWLYVVAPIIGGLAGSGIYTAVKLKDDGTEPPRQVRSFRR 302
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2155047 2158039 + Bda025245.1 Bda07g00175 9065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00175 302 Gene3D Glycerol uptake facilitator protein. 67 296 IPR023271 -
Bda07g00175 302 PRINTS Major intrinsic protein family signature 115 139 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda07g00175 302 PRINTS Major intrinsic protein family signature 196 214 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda07g00175 302 PRINTS Major intrinsic protein family signature 76 95 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda07g00175 302 PRINTS Major intrinsic protein family signature 227 249 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda07g00175 302 PRINTS Major intrinsic protein family signature 264 284 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda07g00175 302 PRINTS Major intrinsic protein family signature 152 171 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda07g00175 302 SUPERFAMILY Aquaporin-like 73 288 IPR023271 -
Bda07g00175 302 CDD MIP 76 281 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda07g00175 302 PANTHER AQUAPORIN NIP5-1-RELATED 13 300 - -
Bda07g00175 302 MobiDBLite consensus disorder prediction 1 28 - -
Bda07g00175 302 Pfam Major intrinsic protein 72 281 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda07g00175 302 ProSitePatterns MIP family signature. 133 141 IPR022357 -
Bda07g00175 302 PANTHER AQUAPORIN NIP2-1 13 300 IPR034294 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda07g00175 Bda08g00383 CCT
Bda07g00175 Bda09g00618 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00491 Bda-Chr5:51712760 Bda07g00175 Bda-Chr7:2155047 1.14E-85 dispersed
Bda07g00175 Bda-Chr7:2155047 Bda12g00572 Bda-Chr12:11762990 9.93E-116 dispersed
Bda07g00175 Bda-Chr7:2155047 Bda09g00618 Bda-Chr9:8973448 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00175 K09874 - csv:101212651 502.671