Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00197 ATGACCCGGGACGGGCTGGGAAATAGAATGCTTGCGATGGCGTCGGCGTTTCTCTACACGTTGATCACGGATCGAGTGGTGCTGATTAACCGAGTGGATGCGTTGGACGATCTTTTCTGCGAGCCGTTCGGGGAGAGATCGTGGTTATTGCCGGAGAATTTTCCGATGAGGGATCAATTCAGGTTCTTTAAGAACTCACTGGGCAACATTTTGAGGGATAATATTCATATCAAACCAAGTGCATTGCCATCATATTTATCTCTCTATCTGTCTCATAATGCCAACAATTATGACAAGCTATTTTACTGCGAGAAACACCAAGCTCTTGTCCAAAACGTTCCATGGCTGATAATGGAGACCAACAACTACATAATTCCAGGTCTTTTCCTCATACCCTCTTTTGAAAAACAGTTTTCTAAATTGTTTCCCAGAAAGGATACTGTTTTTCATCAATTGGGTAGATACCTTTTCCACCCTACAAATGATGTATGGGGACTAATCAGTAGATACAACGATGCCTACTTGTCGAAAGCGAAGGAGAAACTCGGCATCCAAATCCGGGTTTTCAAATCCGAATCCGGGTCTTTCCAACACCATATGGATCAGATTCTGGCCTGCACTCGATTGGGGAATCTCCTCCCGGAGCTAAACACGACGAGGCGGCAGGCGATTCTCCGGCCGAAGACTAGGAAAACAAAGGCGGTTTTGATAACGTCGTTGAGCTCAATGTACCTGGAGAATGCGAAGAAGCTGTACTGGGAATACCCAACTGAAAATGGCGATGTAATTGGGGTTTACCAGCCTAGCCATGAGGATTTTCAGAAGACTGGAGACAGTCTTCACAACAAAAAGGCGTTGGCCGAGATTTATCTGCTGAGCCAGAGTGATGTCCTGGTGACGAGCGCTTGGTCTACTTTTGGGTACGTGGCTCAAGGGCTGGCTGGGTTGAAGCCATGGATTCTGTACAAACCGGAGGGGAAGGTTTTCGGAGGGCTCGACGTGGGGTTGAAGTATAAGAATGAGAATGAAACGGAGCATAGTCTGCCGTGTGGGTTGGCGGCGTCGATGGAGCCTTGCTTTCACGCGCCGCCTGTTTGTGAGTGTGAGAACTTCGGTACGCTTGACGGCGCCACTGCTCTTCCGTTTTTGAAACACTGCGAGGATTTGAGCTGGGGCCTTAAGATTGTCGGTGGGGATTGA 1200 48.08 MTRDGLGNRMLAMASAFLYTLITDRVVLINRVDALDDLFCEPFGERSWLLPENFPMRDQFRFFKNSLGNILRDNIHIKPSALPSYLSLYLSHNANNYDKLFYCEKHQALVQNVPWLIMETNNYIIPGLFLIPSFEKQFSKLFPRKDTVFHQLGRYLFHPTNDVWGLISRYNDAYLSKAKEKLGIQIRVFKSESGSFQHHMDQILACTRLGNLLPELNTTRRQAILRPKTRKTKAVLITSLSSMYLENAKKLYWEYPTENGDVIGVYQPSHEDFQKTGDSLHNKKALAEIYLLSQSDVLVTSAWSTFGYVAQGLAGLKPWILYKPEGKVFGGLDVGLKYKNENETEHSLPCGLAASMEPCFHAPPVCECENFGTLDGATALPFLKHCEDLSWGLKIVGGD 399
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2387543 2388742 - Bda025269.1 Bda07g00197 9087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00197 399 PANTHER FUCOSYLTRANSFERASE 2-RELATED 4 327 IPR004938 GO:0008107|GO:0016020|GO:0042546
Bda07g00197 399 PANTHER FUCOSYLTRANSFERASE 2-RELATED 329 397 IPR004938 GO:0008107|GO:0016020|GO:0042546
Bda07g00197 399 Gene3D - 166 322 - -
Bda07g00197 399 Pfam Xyloglucan fucosyltransferase 3 368 IPR004938 GO:0008107|GO:0016020|GO:0042546
Bda07g00197 399 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE 4 327 - -
Bda07g00197 399 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE 329 397 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00197 Bda-Chr7:2387543 Bda07g01477 Bda-Chr7:27484867 1.79E-148 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00197 K13681 - csv:101222105 486.493