Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00201 ATGGAGTCCGGGTACAGTCACGGAGGGGAAAACTTAGTAGTTGGAGAAGTCAGTGGTAATGGAGTTTTTCTTCAAACGACGGAAGTTGAAGCCAGGCTAGATGGGGGCAACATTCAAGAGGCTGAATCTTCATTACGGGAAGGCTTATCGTTGAATTTTGAGGAAGCCAGAGCTCTTCTTGGAAAGTTGGAGTATCAAAGAGGCAATGTGGAAGGGGCTCTTCGTGTTTTTGATGGCATCGATCTCCAAGCAGCAATTCAGAGATTGCAACCGTCATTTGCTGAAAAGATTCCGTCCAAAAAGGGTCGTTTTCGCACAGATTCGCAGCATGCAGTCTCTCAGCATGCTGCTAACCTGGTACTTGAAGCCATATATTTAAAAGCAAAGTCTCTTCAAAAGCTTGGGAAATTAACTGAGGCTGCTAATGAGTGTCAAAATGTGCTCAATGCTGTGGAGAAGATATTCTATCTAGGCATACCGGATGTGCAAGTTGACAATAGATTGCAAGAGACAGTTAGTCAAGCTGTTGAGCTTCTTCCAGAGCTTTGGAAACAGGCGGGTTGCTACCAGGAAGCAATTTCTGCCTATCGACGAGCACTTTTGAGTCAATGGAACCTTGATAACGATACCTCCACTAGGATTCACAAAGGATTTGCAGTTTTTCTACTTTACGGAGGAGTAGAAGCTAGCCCTCCTAGTTTAGCAGTTCAGGGTGAAGGCTCATATGTACCCAAAAACAATATAGAAGAGGCAATTCTACTTATGTTGATTCTAATGAAGAATTTTTTACTTGGTAAGATCAATTGGGATCCATCAGTAATGGATCACTTAACATTTGCGCTATCTTTATGCAGCCAAACTTCAATTTTAGCTAAGCAATTTGAAGAAATCATGCCTGGAGTATATCACCGTATAGATCGATGGATGTCTTTAGCTCTTTGTTACAGTGGAGCAGGACAAAATAAATCTTCCTTAAACCTGTTGAGGAAGTCCTTGCACAAACACGAAAAACCGAATGATATGCTGACACTGTTATTGGCTGCAAAGATCTGCAGTGAAGATTCTTACCTTGCTGCTGAAGGAGTTGGATATGCCCAAAGGGCGATTCATAATGCAATCGGGAAAGAAGAGCATTTAAAGGGCGTGGGCCTTCGGATGTTAGGTCTTTGTTTGGGAAAGCAAGCGAAGACATCCTCCTCCGATTTTGAGAGGTCAAGTCTTCAGTCGGAGGCATTGAAATCTCTCGATGGGGCAGCTTCTCTGGAGCGCAATAATTCCGATTTGAATAGTGAGTTGGGAGTTCAATATGCAGAACACAGGAATTTGATTGCTGCTTTGCGTTATGCGAAGAAGTATATCGATAAAACTGGTGGTTCTGTCTTAAAAGGCTGGAAATTGCTTGCTCTTGTGTTGTCTTCTCAGAAAAGATTTGCAGAGGCTGAGGTGGTAACCGATGCAGCTTTAGATGAGACTGCAAAATGGGAGCAAGGACCACTTCTCAGGCTTAAAGCTAAGCTGAAAATCTCCCAGTCACTACACATGGATGCTATCGAAACTTATCGTTACCTCCTGGCATTAGTTCAAGCTCAAAGAAAATCATTCGGGCGGCCACTTAAACTTGTTAATCAGATTGAGGATGATAAGGTGCAGGAATTTGAAATATGGCATGGCCTGGCAAACCTATACGCTGGCCTTTCACATTGGAAAGATGCAGAGATATGTGTGATATGCGAAGGACGTGGACAATTCCCAGAAGCGCTGTCTGCTTATATCAATGCTCTCCTACTTGAGCCTTGCTATGTTCCCTGCAAGATATTGATTGGTGCTCTGTTGACCAAAACAGGCTCACAGTTGCCGATTGCCAAATCCTTGCTCTCCGATGCATTGAGGATCGACCCGACCAATAGGATGGCTTGGTATTATTTGGGAGTTGTTCATAAGGAGGACGGGCGAGTAGCTGATGCCATCGATTGCTTTCAGGCTGCGTCAATGCTCGAAGAATCCGATCCAATCGAAAGCTTCGGCTCTATTCTCTAA 2037 43.84 MESGYSHGGENLVVGEVSGNGVFLQTTEVEARLDGGNIQEAESSLREGLSLNFEEARALLGKLEYQRGNVEGALRVFDGIDLQAAIQRLQPSFAEKIPSKKGRFRTDSQHAVSQHAANLVLEAIYLKAKSLQKLGKLTEAANECQNVLNAVEKIFYLGIPDVQVDNRLQETVSQAVELLPELWKQAGCYQEAISAYRRALLSQWNLDNDTSTRIHKGFAVFLLYGGVEASPPSLAVQGEGSYVPKNNIEEAILLMLILMKNFLLGKINWDPSVMDHLTFALSLCSQTSILAKQFEEIMPGVYHRIDRWMSLALCYSGAGQNKSSLNLLRKSLHKHEKPNDMLTLLLAAKICSEDSYLAAEGVGYAQRAIHNAIGKEEHLKGVGLRMLGLCLGKQAKTSSSDFERSSLQSEALKSLDGAASLERNNSDLNSELGVQYAEHRNLIAALRYAKKYIDKTGGSVLKGWKLLALVLSSQKRFAEAEVVTDAALDETAKWEQGPLLRLKAKLKISQSLHMDAIETYRYLLALVQAQRKSFGRPLKLVNQIEDDKVQEFEIWHGLANLYAGLSHWKDAEICVICEGRGQFPEALSAYINALLLEPCYVPCKILIGALLTKTGSQLPIAKSLLSDALRIDPTNRMAWYYLGVVHKEDGRVADAIDCFQAASMLEESDPIESFGSIL 678
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2411668 2415579 - Bda025273.1 Bda07g00201 9091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00201 678 SMART tpr_5 305 338 IPR019734 GO:0005515
Bda07g00201 678 SMART tpr_5 461 494 IPR019734 GO:0005515
Bda07g00201 678 SMART tpr_5 121 154 IPR019734 GO:0005515
Bda07g00201 678 SMART tpr_5 636 669 IPR019734 GO:0005515
Bda07g00201 678 SUPERFAMILY TPR-like 34 200 IPR011990 GO:0005515
Bda07g00201 678 Gene3D Tetratricopeptide repeat domain 275 574 IPR011990 GO:0005515
Bda07g00201 678 Gene3D Tetratricopeptide repeat domain 27 226 IPR011990 GO:0005515
Bda07g00201 678 PANTHER CALMODULIN-BINDING PROTEIN 6 677 - -
Bda07g00201 678 SUPERFAMILY TPR-like 522 660 IPR011990 GO:0005515
Bda07g00201 678 Pfam Tetratricopeptide repeat 620 662 - -
Bda07g00201 678 SUPERFAMILY TPR-like 121 490 IPR011990 GO:0005515
Bda07g00201 678 Gene3D Tetratricopeptide repeat domain 575 672 IPR011990 GO:0005515
Bda07g00201 678 ProSiteProfiles TPR repeat profile. 636 669 IPR019734 GO:0005515
Bda07g00201 678 PANTHER PROTEIN NPG1 6 677 IPR043376 -
Bda07g00201 678 SUPERFAMILY TPR-like 409 574 IPR011990 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00201 Bda-Chr7:2411668 Bda09g00603 Bda-Chr9:8754309 0 dispersed
Bda07g00201 Bda-Chr7:2411668 Bda09g00595 Bda-Chr9:8496964 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00201 K21843 - csv:101206641 1048.88