Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00229 ATGCCGTCGTCTAACTTCTTCCCGTTGCTTCTTCTTCTTCTCCATGGTTTTGAAACCCAGTCTCCTCAAGGTTACGTTGAAGCTCAAATATCTATTGCAAATATATCAGATGATGGTCTTTCTTTGTTGAATTTCAAGTCTATGATTGAAGATCCTTTTGGAGTTCTTAGTTCCTGGAACAATTCTCTCCATTTTTGCAGATGGGAAGGAGTCACTTGCGGCCGTCGCCATCAACGAGTCACCAGTTTGGACTTAAGCCATAAAAGTTTGGTTGGTTCTTTGTCTCCTTCCTTAGGCAACCTCACTTTTCTTAAAGACATATATTTGTATGACAACATATTCAATGGGAGAATCCCGGAAGAGATAGGTCGTCTATCAAGATTGGAGGTTTTGTCTCTCGCGAATAACTCATTGAGCGGAGAGATCCCTAGAAATCTCTCTCGTTGCTCCAAACTCTTCTTTCTGAACATTGGTAGTAACAATCTAGTCGGTGACTTTCCGATTGAGATATTTGGCATTTCCGGCCTTCAATTTCTTGCATTCCACCAAAACAACATTTCAGGAGAGATCTCGTCTCATATAGCAAATCTCACTTCATTAGAGACATTGTCCATTTCAATCAATCATTTAGGTGGAGGCATACCCTCCTCGATCGGCCTTCTCAGAAACTTGAAGGCCTTAGCATTAGGCGGGAATCGACTTTCAGGCGTCTTACCTTCATCCATGTACAACCTTTCATTGATCGAAAAGTTCTCTGTCTCAGTTAATCGACTTCATGGAAGCCTACTGCCTGACATAGGCCACTCTTTCCCTAAGCTTAGAGTCTTCCAAATCGGTTCCAATAACTTTACAGGCGTTGTTCCTCCTTCCTTTTCCAATGCGTCAAACATAGAGTATCTTGAATTAGCTGAGAACAACTTCTTTGGAAAAGTGAGTGTTGATTTTGGTGGCGCCAAAAACTTATCAGCACTGCTTTTATCACTAAATTATCTCGGAAGCGGAGATCCTGACGAACTGGATTTTCTAATCTCGTTGGCGAATTGCAGTAAGTTATCTCGATTGAATTTGTACGGTAACTCATTTACAGGAATCCTACCTAGTTCGTTGGCAAACCTATCCACTCATCTCAAACTTTTTGTAGTGGGAAATAATCGATTGTTCGGTAAAATACCATCAGGAATTGGCAATCTTGTCGGCTTAGAGCATATAGTACTGAGCTTCAATGATCTTACAGGTGACTTGCCCTCTGAAATTGGTAGGCTTTTGAACTTGGTAGTTGTCGGTGCACCTTCAAATGGTCTTTCAGGAGAGCTTCCTTCTGCCATTGGAAACTTAACAAAATTGTTCAAACTTGATCTACAAACGAATAATTTTCATGGAGCCATTCCACGGAGCATTGAAAATTGCCAGGAGCTGTCCTTCTTGTCACTTCGCAAGAATAATCTTAGTGGCAGCCTTCCCAAACAAGTTTTTAACTTTCCAAATTTAGGAAACACATTGGATTTATCTTGCAACAAATTTAGTGGAGAACTACCTGCTGAAATCGGTGGTATAAAAAGATTGACTTCATTATATCTATCAAATAATGAGTTTTTTGGAAATATTCCGAGCCAACTCAGTGATTGCGGAAGTTTGGAATATCTGGCCATGCAGGGGAATTACTTCCATGGATCTATTCCTCCAACTTTCAGTTCGTTGAAAAGCCTTCGACAACTTGATCTTTCTAGCAACAATTTATCTGGTCAAGTTCCAGATTTTCTGTCAACTTTTTCGCTCACCTATTTGAACTTATCTTTCAATAATTTTGAGGGCGAGGTTCCAACAAATGGAGTTTTTTCAAATGCATCTTTGTTCTCATTGCTAGGGAATGAGAGACTCTGCGGTGGAATCACCTCTCTGCGCCTGCCCAATTGTACTCATGAAGCAAGTAAGAAGCCAAAATTGACCAAGCTTCTGAAAATTATTCTATCTCTATGCATTTGTCTCTTTGTGCTGGCTGCAATATCATTCTTCTTACTCTGTTTGGTTCCTAAGAAAAAGAGAAAGAAAGCGGAAGCATCAAAATTGGAAGACCCATTATTCCTAGAGGTTTCATACAATGACCTCCTTAAAGCAACAGATAATTTCTCTTCGATTAATTTGATTGGAAATGGATACTTCAGCTTTGTATATAAGGGTTATCTCGAAAAGATAGGAGAAACAGTCGCCATTAAAGTACTTAATCTTGAGCGTCATGGAGCAATGAAAAGTTTTGCATCAGAATGCGAAGCATTGAGAAATATTCGTCATACAAATCTATTGAAAACAATAACTTCATGCTCCTCTGTTAATTTCCATGGAAATGACTTCAAAGCTCTTGTTTATGAATTCATGGCTAATGGAAGTCTAGATTCATGGCTGCATGTCAGCAGTAGATCAGGTCGAGAGGGAGGAGATCTGAAATTTCTTCAATGTGTAAATATTGCAATCGATGTGGCTACAGGACTCGATTATCTTCACAAACATTGTCATATCCCAATTGTTCATTGTGATTTGAAGCCGAGTAACATTCTTCTGGATGAAGACATGACTGCCCATATTGGAGATTTTGGACTAACAAAACTTCTTCCTGAACTAACAAACTCTACTGAAAATAGCTCAATTGGAATACGAGGAACAATTGGTTACACTGCTCCGGAATATGGTCAGGGAAGTGAGGTTTCCGCTCAGGGTGACATCTATAGCTACGGGATTGTACTGTTAGAAATGATAACAAGAAAAAGACCAACTGATGAGATGTTCATTGAAGGACTAGACCTCCATTCTTATGCTAAGAGGGCACTATCTGGCCAAGTACTTGACATTGTTGATCCATGCCTCTTGCCTAGCAAAGAATCAGAGAAGACTAAAACTATAAACTCTTTGGTTTCTATGGTAAAGCTTGGAGTGGCGTGTTCGGCAAAATCTCCGCGAGAACGGATTGACGCCAAAAGCATTTGTCATGAGCTGCGAATAGTAAGAAATTCTTTGCTTGAGCGGAACCATACTTGA 3030 39.93 MPSSNFFPLLLLLLHGFETQSPQGYVEAQISIANISDDGLSLLNFKSMIEDPFGVLSSWNNSLHFCRWEGVTCGRRHQRVTSLDLSHKSLVGSLSPSLGNLTFLKDIYLYDNIFNGRIPEEIGRLSRLEVLSLANNSLSGEIPRNLSRCSKLFFLNIGSNNLVGDFPIEIFGISGLQFLAFHQNNISGEISSHIANLTSLETLSISINHLGGGIPSSIGLLRNLKALALGGNRLSGVLPSSMYNLSLIEKFSVSVNRLHGSLLPDIGHSFPKLRVFQIGSNNFTGVVPPSFSNASNIEYLELAENNFFGKVSVDFGGAKNLSALLLSLNYLGSGDPDELDFLISLANCSKLSRLNLYGNSFTGILPSSLANLSTHLKLFVVGNNRLFGKIPSGIGNLVGLEHIVLSFNDLTGDLPSEIGRLLNLVVVGAPSNGLSGELPSAIGNLTKLFKLDLQTNNFHGAIPRSIENCQELSFLSLRKNNLSGSLPKQVFNFPNLGNTLDLSCNKFSGELPAEIGGIKRLTSLYLSNNEFFGNIPSQLSDCGSLEYLAMQGNYFHGSIPPTFSSLKSLRQLDLSSNNLSGQVPDFLSTFSLTYLNLSFNNFEGEVPTNGVFSNASLFSLLGNERLCGGITSLRLPNCTHEASKKPKLTKLLKIILSLCICLFVLAAISFFLLCLVPKKKRKKAEASKLEDPLFLEVSYNDLLKATDNFSSINLIGNGYFSFVYKGYLEKIGETVAIKVLNLERHGAMKSFASECEALRNIRHTNLLKTITSCSSVNFHGNDFKALVYEFMANGSLDSWLHVSSRSGREGGDLKFLQCVNIAIDVATGLDYLHKHCHIPIVHCDLKPSNILLDEDMTAHIGDFGLTKLLPELTNSTENSSIGIRGTIGYTAPEYGQGSEVSAQGDIYSYGIVLLEMITRKRPTDEMFIEGLDLHSYAKRALSGQVLDIVDPCLLPSKESEKTKTINSLVSMVKLGVACSAKSPRERIDAKSICHELRIVRNSLLERNHT 1009
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2730530 2733640 + Bda025302.7 Bda07g00229 9119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00229 1009 Gene3D Ribonuclease Inhibitor 192 346 IPR032675 -
Bda07g00229 1009 SUPERFAMILY L domain-like 374 628 - -
Bda07g00229 1009 ProSitePatterns Serine/Threonine protein kinases active-site signature. 840 852 IPR008271 GO:0004672|GO:0006468
Bda07g00229 1009 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 27 1004 - -
Bda07g00229 1009 Gene3D Transferase(Phosphotransferase) domain 1 791 1008 - -
Bda07g00229 1009 Gene3D Phosphorylase Kinase; domain 1 690 790 - -
Bda07g00229 1009 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 27 1004 - -
Bda07g00229 1009 Gene3D Ribonuclease Inhibitor 347 641 IPR032675 -
Bda07g00229 1009 ProSiteProfiles Protein kinase domain profile. 709 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g00229 1009 Gene3D Ribonuclease Inhibitor 36 191 IPR032675 -
Bda07g00229 1009 SMART LRR_typ_2 445 469 IPR003591 -
Bda07g00229 1009 SMART LRR_typ_2 566 590 IPR003591 -
Bda07g00229 1009 SMART LRR_typ_2 125 149 IPR003591 -
Bda07g00229 1009 SMART LRR_typ_2 518 542 IPR003591 -
Bda07g00229 1009 SMART LRR_typ_2 397 421 IPR003591 -
Bda07g00229 1009 SMART LRR_typ_2 221 244 IPR003591 -
Bda07g00229 1009 SMART LRR_typ_2 348 371 IPR003591 -
Bda07g00229 1009 ProSitePatterns Protein kinases ATP-binding region signature. 715 738 IPR017441 GO:0005524
Bda07g00229 1009 SMART serkin_6 709 1004 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g00229 1009 Pfam Leucine Rich Repeat 350 372 IPR001611 GO:0005515
Bda07g00229 1009 SUPERFAMILY Protein kinase-like (PK-like) 691 996 IPR011009 -
Bda07g00229 1009 Pfam Protein kinase domain 710 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g00229 1009 Pfam Leucine rich repeat N-terminal domain 36 73 IPR013210 -
Bda07g00229 1009 SUPERFAMILY L domain-like 56 371 - -
Bda07g00229 1009 Pfam Leucine rich repeat 544 602 IPR001611 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00229 Bda-Chr7:2730530 Bda15g00643 Bda-Chr15:9641376 0 dispersed
Bda07g00229 Bda-Chr7:2730530 Bda07g00231 Bda-Chr7:2902867 0 proximal
Bda07g00228 Bda-Chr7:2629426 Bda07g00229 Bda-Chr7:2730530 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69694 PF00069 Pkinase 4.80E-42 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00229 - - csin:114298217 982.63