Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00230 ATGAAAAAGAAAGCAGAATCATCAAAATTGGAGGACCCATTATTCCTGGAAGTGTCATACGGTGACCTCCTTAAAGCAACAGACAACTTCTCTTCGAATAATTTGATTGGGAATGGATACTTCAGCTCTGTATATAAGGGTTACCTTGAAACGACAGAAGAAACAGTCGCCATTAAAGTACTTAATCTTGAACGCCATGGAGCAGTGAGAAGTTTTTCATCTGAATGTGAAGCGTTGAGACATATTCGTCACAGAAATTTATTGAAAACAATTACTTCATGCTCCACCATTGATTTCCATGGAAATGATTTCAAAGCTTTTGTTTATGAGTTCATGGCTAATGGAAGTTTGGATTCATATCTGCATGTCAGCGCCAGTCATGGTAGAGAAGGAGGAGATTTGAAATTTCTTCAACGCGTAAATATTGCAATCGACGTGGCCACAGGACTCGACTACCTTCACAATCATTGTTATATCCCAATCATTCATTGTGATTTGAAGTCGAGTAACATTCTTCTAGATGAAGAAATGACTGCACATATTGGAGATTTCGGGCTAGCAAAACTTCTTCCTGAACTAACAAACTTTACTGAAAATAACTCGATCGAGATACGAGGAACAATTGGTTACGCTGCTCCAGGTACAACAAAGGAACAATCAAAGTACAATTTATTAAATATTTCTTATTATGAATCCATTCATGAATAG 708 37.15 MKKKAESSKLEDPLFLEVSYGDLLKATDNFSSNNLIGNGYFSSVYKGYLETTEETVAIKVLNLERHGAVRSFSSECEALRHIRHRNLLKTITSCSTIDFHGNDFKAFVYEFMANGSLDSYLHVSASHGREGGDLKFLQRVNIAIDVATGLDYLHNHCYIPIIHCDLKSSNILLDEEMTAHIGDFGLAKLLPELTNFTENNSIEIRGTIGYAAPGTTKEQSKYNLLNISYYESIHE 235
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2888667 2889374 + Bda025303.1 Bda07g00230 9120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00230 235 ProSitePatterns Protein kinases ATP-binding region signature. 36 59 IPR017441 GO:0005524
Bda07g00230 235 ProSiteProfiles Protein kinase domain profile. 30 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g00230 235 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Bda07g00230 235 Pfam Protein kinase domain 32 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g00230 235 SUPERFAMILY Protein kinase-like (PK-like) 13 219 IPR011009 -
Bda07g00230 235 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 4 214 - -
Bda07g00230 235 PIRSF ILK 17 223 - -
Bda07g00230 235 Gene3D Transferase(Phosphotransferase) domain 1 19 224 - -
Bda07g00230 235 SMART serkin_6 30 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g00230 235 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 4 214 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00230 Bda-Chr7:2888667 Bda09g00302 Bda-Chr9:3786046 3.12E-128 dispersed
Bda07g00228 Bda-Chr7:2629426 Bda07g00230 Bda-Chr7:2888667 2.99E-134 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69695 PF00069 Pkinase 1.70E-32 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00230 - - pop:7470963 267.314