Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00231 ATGCTGTCGTCTAACTTCTTCCCGTTGCTTCTTCTTCTTCTCCATGGTTTTGAAACTCAGTCTCCCCATGGTTATGTTGAAGCTCAAACCTCTGTTGCAAATATATCAGATGATCGTCTTTCTTTGTTGGATTTCAAGTCCATGATTGAAGATCCTTTTGGAGTTCTTAGTTCTTGGAACGATTCTCTCCATTTTTGCAGATGGGAAGGAGTCACTTGCGGCCGTCGCCATCGACGAGTCACCATTTTAGACCTCAGCCATAAAAGCTTGGTCAGTTCTTTGTCTCCATCGTTGGGTAACCTCACTTTTCTTAGATACATATATTTGCAGAACAATACGTTCCGAGGGAAAATCCCAGAGGAGATAGGTCGTCTATCCAGATTGAAGGTTTTGTTTCTCCATAACAACTCATTGAACGGAGAGATCCCTAGAAATCTCTCTCGTTGTTCCAAGCTCTTATTTCTGAACCTTGGTTTCAACAATCTAGTCGGTAACTTTCCGATTGAGATATTTGGCATTTTCGGCCTTCAATTTCTTGCATTCCACGAGAACAACATTTCAGGAGAGATCTCGTCTCATATAGAAAATCTCACTTCATTAGATACATTGGCTATGACATTCAATCATTTAAGTGGAGGCATACCCTCCTCGATCGGCCTTCTCAGAAACTTGAATTTCTTAGCATTAGGCGGAAATCGACTTTCAGGCGTCTTACCTTCATCTATGTACAACCTTTCATTGATCGAAACGTTCTCTGTCGCAGGTAATCAACTTCATGGAAGCCTACTACCTGACATAGGCCACTCTTTCCCTAAGCTTAGATACTTCCAAATTGGCTTCAATAACTTTACAGGCTGTGTTCCTCCTTCCTTTACCAATGCTTCAAACATAGAGTATCTTGAATTAGTTGCGAACAACTTCTTTGGAAAAGTGAGTGTTGATTTTTGTGGCGCCAAAAACTTATCAGCACTGCATTTATCACAAAATTATCTCGGAAGTGGAGATCCCGACGAACTGGATTTTCTTATCTCGTTGGCGAATTGCAGCAAGTTATCTCGATTGAATTTGTATGATAACCCATTTAGTGGAATCCTGCCTGATTCGTTAGCCAACCTATCCACTCATCTCAAACTTTTTACAGTGGGAAAAAATCGATTGTTCGGTAAAATACCATCAGGAATTGGCAATCTTGTCGGCTTAGAGATTTTATATTTGGGCTTCAATGATCTTACAGGTGGCTTGCCCTCTGAAATTGGCAGACTTCTAAACTTGAGATATCTCACCGCAACTTCAAATGGTTTTTCAGGAGAAGTTCCTGCTGCCATTGGAAACTTAACACAGTTGATTGCACTTGATCTGCAGATTAATAATTTTAATGGAACCATTCCAGCTAGCATTGAAAATTGTAAGGAGCTGTTCTTCTTGTCTGTTGGCCAGAATAATCTGAGTGGCAACCTTCCTAAACAAGTTTTTAACTTTCCAAACTTAGGACATACGTTGAATTTATCTAACAACAAATTTAGTGGAGAATTGACCGTTGAAATAGGTAGTTTGAAAAGACTTGCTTCGTTAGATTTATCTAATAATGATTTTTTTGGAAATATTCCGAGCCAAATCAGTGATTGTGCAAGCTTGGAATATCTCGACATGCAGGGAAATTACTTCCATGGATCTATTCCTCCAAGCTTCAGTTCGTTGAGAGGCCTTCGACAACTTGATCTTTCTAACAACAATTTGTCTGGTCAAGTTCCAGATTTCCTATCAACCTTTTCGCTCACCTATTTGAACTTATCTTTCAATAATTTTGAGGGCGAGGTTCCAACTAATGGAATTTTTTCAAATGCTTCTTTATTCTCATTGCTCGGGAATGAGAGACTCTGCGGTGGAATCACTGCTCTGCGCCTCCCCAATTGTACTCATGAAGCAAGTAAGAAGCCAAAATTGACCAAGCTTCTGAAAATTATTTTATCTCTATGCATTTGTCTCATTGGGATGGCTGCAATATCATTTTTCTTAATCTGTTTAGTTCCTAAGAAAAAGAGAATGAAAGCAGAAGCATCAACATTGGAAGACCCATTATTCCTAGAGGTCTCATACAGTGATCTCCTTAAAGCAACAGATAACTTCTCTTCGATTAATTTGATTGGAAATGGATACTTCAGCTCTGTATATAAGGGTTATCTCGAAAAGTTAGGAGAAACAGTTGCCATTAAAGTACTTAATCTTGAACTCCATGGAGCAATGAAAAGTTTTGCATCAGAATGCGAAGCGTTGAGAAATATTCGTCATAGAAATCTATTGAAAACAATTACTTCATGCTCCTCTGTTGATTTTCATGGAAACGATTTCAAAGCTCTTGTTTATGAATTCATGGCCAATGGAAGTCTAGATTCATGGCTGCATGTCAGCAGTAGTCCAAGTCGAGAGGGAGGAGATCTGAAATTTCTTCAACGTGTAAATATTGCAATCGATGTGGCTACAGGACTCGATTATCTTCACAGGCATTGTCATATCCCAATCGTTCATTGCGATTTGAAGCCGAGCAACATTCTTCTAGACGAAGACATGACTGCCCATATTGGAGATTTTGGGCTAACAAAACTTTTTCCTGAAATAACAAACTTTACTGAAAATAGCTCGATCGGAATACGAGGAACAATTGGATACGCTGCTCCGGAATATGGTCAGGGAAGTGAGGTTTCTGCTCAGGGTGACATCTATAGCTACGGGATTCTACTGTTAGAGATGATAACAAGAAAAAAACCAACTGATGAGATATTCATTGAAGGACTAGACCTCCATTCTTATGCTGAGAGGGCACTATCTGGCCAAGTACTTGACATTGTTGATCCATGCCTCTTGCCTAGCAAAGAATCAGAGAAAACTAAAACTATAGACTCTTTGGTTTCTATGGTAAAGCTCGGAGTGGCGTGTTCGGCAAAATCTCCACGAGAACGGATTGACGCTAAAAGCATTTGTCATGAGCTGCGAATAGTAAAGAAATTCTTTGCTTGA 3015 39.57 MLSSNFFPLLLLLLHGFETQSPHGYVEAQTSVANISDDRLSLLDFKSMIEDPFGVLSSWNDSLHFCRWEGVTCGRRHRRVTILDLSHKSLVSSLSPSLGNLTFLRYIYLQNNTFRGKIPEEIGRLSRLKVLFLHNNSLNGEIPRNLSRCSKLLFLNLGFNNLVGNFPIEIFGIFGLQFLAFHENNISGEISSHIENLTSLDTLAMTFNHLSGGIPSSIGLLRNLNFLALGGNRLSGVLPSSMYNLSLIETFSVAGNQLHGSLLPDIGHSFPKLRYFQIGFNNFTGCVPPSFTNASNIEYLELVANNFFGKVSVDFCGAKNLSALHLSQNYLGSGDPDELDFLISLANCSKLSRLNLYDNPFSGILPDSLANLSTHLKLFTVGKNRLFGKIPSGIGNLVGLEILYLGFNDLTGGLPSEIGRLLNLRYLTATSNGFSGEVPAAIGNLTQLIALDLQINNFNGTIPASIENCKELFFLSVGQNNLSGNLPKQVFNFPNLGHTLNLSNNKFSGELTVEIGSLKRLASLDLSNNDFFGNIPSQISDCASLEYLDMQGNYFHGSIPPSFSSLRGLRQLDLSNNNLSGQVPDFLSTFSLTYLNLSFNNFEGEVPTNGIFSNASLFSLLGNERLCGGITALRLPNCTHEASKKPKLTKLLKIILSLCICLIGMAAISFFLICLVPKKKRMKAEASTLEDPLFLEVSYSDLLKATDNFSSINLIGNGYFSSVYKGYLEKLGETVAIKVLNLELHGAMKSFASECEALRNIRHRNLLKTITSCSSVDFHGNDFKALVYEFMANGSLDSWLHVSSSPSREGGDLKFLQRVNIAIDVATGLDYLHRHCHIPIVHCDLKPSNILLDEDMTAHIGDFGLTKLFPEITNFTENSSIGIRGTIGYAAPEYGQGSEVSAQGDIYSYGILLLEMITRKKPTDEIFIEGLDLHSYAERALSGQVLDIVDPCLLPSKESEKTKTIDSLVSMVKLGVACSAKSPRERIDAKSICHELRIVKKFFA 1004
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2902867 2905962 + Bda025304.1 Bda07g00231 9121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00231 1004 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 24 1001 - -
Bda07g00231 1004 Pfam Leucine Rich Repeat 350 372 IPR001611 GO:0005515
Bda07g00231 1004 Gene3D Ribonuclease Inhibitor 34 175 IPR032675 -
Bda07g00231 1004 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 24 1001 - -
Bda07g00231 1004 Pfam Protein kinase domain 710 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g00231 1004 ProSitePatterns Serine/Threonine protein kinases active-site signature. 840 852 IPR008271 GO:0004672|GO:0006468
Bda07g00231 1004 SUPERFAMILY Protein kinase-like (PK-like) 687 996 IPR011009 -
Bda07g00231 1004 ProSiteProfiles Protein kinase domain profile. 709 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g00231 1004 SMART LRR_typ_2 445 469 IPR003591 -
Bda07g00231 1004 SMART LRR_typ_2 348 371 IPR003591 -
Bda07g00231 1004 SMART LRR_typ_2 221 244 IPR003591 -
Bda07g00231 1004 SMART LRR_typ_2 125 149 IPR003591 -
Bda07g00231 1004 SMART LRR_typ_2 518 542 IPR003591 -
Bda07g00231 1004 SMART LRR_typ_2 397 421 IPR003591 -
Bda07g00231 1004 SMART LRR_typ_2 566 590 IPR003591 -
Bda07g00231 1004 Pfam Leucine rich repeat 544 602 IPR001611 GO:0005515
Bda07g00231 1004 Pfam Leucine rich repeat N-terminal domain 36 73 IPR013210 -
Bda07g00231 1004 ProSitePatterns Protein kinases ATP-binding region signature. 715 738 IPR017441 GO:0005524
Bda07g00231 1004 Gene3D Ribonuclease Inhibitor 265 647 IPR032675 -
Bda07g00231 1004 SMART serkin_6 709 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g00231 1004 Gene3D Ribonuclease Inhibitor 176 264 IPR032675 -
Bda07g00231 1004 SUPERFAMILY L domain-like 375 628 - -
Bda07g00231 1004 Gene3D Transferase(Phosphotransferase) domain 1 791 1002 - -
Bda07g00231 1004 SUPERFAMILY L domain-like 36 307 - -
Bda07g00231 1004 Gene3D Phosphorylase Kinase; domain 1 690 790 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00231 Bda-Chr7:2902867 Bda09g00302 Bda-Chr9:3786046 0 dispersed
Bda07g00229 Bda-Chr7:2730530 Bda07g00231 Bda-Chr7:2902867 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69696 PF00069 Pkinase 4.20E-41 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00231 - - pop:7470963 1009.21