Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00273 GTAATGGCAGCCAATGGTAGCTCCACTGTTCTCAGAAATACCCCATTTTTGGGTCAAAACAGAGCATCTAGCTCTCACTCTCTCAGAGATGTTGTTTCCATGGGCAATGGAAAGTACTCCATGGGTCTTGACTTGTGGTATGGACCAGACAGGGTGAAGTACTTGGGACCATTTTCAGCTCAGACCCCCTCATATCTCACCGGAGAATTCCCCGGTGACTATGGTTGGGACACCGCCGGACTATCTGCCGATCCAGAGGCATTCGCCAAGAACAGAGCACTTGAGGTAATCCACGGGAGGTGGGCGATGCTCGGAGCACTCGGATGCATAACCCCGGAAGTCCTCCAAAAATGGCTCAATGTCAACTTCAAAGAGCCAATCTGGTTCAAAGCAGGATCACAAATCTTCACAGAAGGAGGATTAGACTATCTCGGAAACCCGAATCTCGTTCACGCCCAAAGCATCCTCGCCGTTCTCGGCTGTCAAGTAATTCTAATGGGTCTAGTCGAAGGTTACCGCATCAATGGCTTAGACGGAGTAGGCGACGGCAATGACCTCTACCCGGGTGGCCAATATTTTGACCCACTTGGTCTGGCTGATGATCCAGTCACTTTCCAAGAGCTCAAAGTGAAAGAAATCAAAAATGGCCGCCTGGCAATGTTCTCCATGTTTGGATTCTTTGTCCAAGCCATTGTTACAGGAAAAGGTCCTCTGGAGAACCTCCTCGACCACCTTGACAACCCAGTTGCTAATAATGCTTGGGTTTATGCCACAAAATTCGCACCTGGATCA 792 49.49 VMAANGSSTVLRNTPFLGQNRASSSHSLRDVVSMGNGKYSMGLDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLQKWLNVNFKEPIWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGCQVILMGLVEGYRINGLDGVGDGNDLYPGGQYFDPLGLADDPVTFQELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3895327 3896394 + Bda033833 Bda07g00273 9163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00273 264 Gene3D Chlorophyll a/b binding protein domain 53 257 - -
Bda07g00273 264 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 4 264 - -
Bda07g00273 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 4 264 IPR001344 GO:0009765|GO:0016020
Bda07g00273 264 Pfam Chlorophyll A-B binding protein 63 230 IPR022796 -
Bda07g00273 264 SUPERFAMILY Chlorophyll a-b binding protein 45 261 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00273 Bda-Chr7:3895327 Bda09g00367 Bda-Chr9:4684261 0 dispersed
Bda09g00836 Bda-Chr9:18832807 Bda07g00273 Bda-Chr7:3895327 1.10E-33 dispersed
Bda09g00903 Bda-Chr9:25323012 Bda07g00273 Bda-Chr7:3895327 2.00E-28 dispersed
Bda07g00273 Bda-Chr7:3895327 Bda06g00422 Bda-Chr6:6327486 2.49E-125 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00273 K08914 - gmx:100779387 486.878