Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00314 ATGGCGCCGAGAGATAGATCCGCCGCGCCGGACCCGAACTCTGCTTCGGGCTCTAGGGAAATTAGATTTCGAGGCGTGAGGAAGAGGCCATGGGGAAGGTACGCGGCGGAGATTCGCGACCCTGGAAAGAAGACGCGGGTTTGGCTGGGGACCTTCGATACTGCGGAAGAGGCGGCGCGTGCTTATGATGCTGCCGCGCGTGAGTTTCGTGGGTCGAAAGCTAAGACTAATTTCCCTACTCCGTCGGATCTCTTTGGGGCGGATGGAAATCAGAACTTCACACGCGGTAGTCCCAGTCAGACCAGCACCGTCGAGTCGTCTTCTCCTCCGCCGCCGTTGGACCTCACTCTCACTCCCGTTTCCATTGCTGCTGGTCGTTTCGCCGGGAGTTGCTATCCTCCCAGAGGTTTCCAAGCGGTTACGATGGGCCGTCCGCTTTACTTCGATGCTTTCGCACGATCAGAGAAGACGAGAGTGACCCATCGGGAAATGCAAAAGTTTTACACTGCGATGGTTTCTGATTTCCGGCCGGTCATGGCAGGCGGCGCACAGAGTGACTCCGGTTCGTCGTCGGTGGTCGATTTCAATCAATTAGATCTCGATCTTAACCAGCCTCCTCCACCCGAGGTCGCCTAA 636 57.23 MAPRDRSAAPDPNSASGSREIRFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDAAAREFRGSKAKTNFPTPSDLFGADGNQNFTRGSPSQTSTVESSSPPPPLDLTLTPVSIAAGRFAGSCYPPRGFQAVTMGRPLYFDAFARSEKTRVTHREMQKFYTAMVSDFRPVMAGGAQSDSGSSSVVDFNQLDLDLNQPPPPEVA 211
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4206083 4206735 + Bda025397.1 Bda07g00314 9204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00314 211 MobiDBLite consensus disorder prediction 183 198 - -
Bda07g00314 211 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 197 - -
Bda07g00314 211 SUPERFAMILY DNA-binding domain 23 80 IPR016177 GO:0003677
Bda07g00314 211 PRINTS Ethylene responsive element binding protein signature 45 61 IPR001471 GO:0003700|GO:0006355
Bda07g00314 211 PRINTS Ethylene responsive element binding protein signature 23 34 IPR001471 GO:0003700|GO:0006355
Bda07g00314 211 Pfam AP2 domain 22 71 IPR001471 GO:0003700|GO:0006355
Bda07g00314 211 ProSiteProfiles AP2/ERF domain profile. 22 79 IPR001471 GO:0003700|GO:0006355
Bda07g00314 211 SMART rav1_2 22 85 IPR001471 GO:0003700|GO:0006355
Bda07g00314 211 CDD AP2 22 79 IPR001471 GO:0003700|GO:0006355
Bda07g00314 211 Gene3D AP2/ERF domain 21 80 IPR036955 GO:0003700|GO:0006355
Bda07g00314 211 MobiDBLite consensus disorder prediction 75 111 - -
Bda07g00314 211 MobiDBLite consensus disorder prediction 1 26 - -
Bda07g00314 211 PANTHER ERF FAMILY PROTEIN 1 197 - -
Bda07g00314 211 MobiDBLite consensus disorder prediction 70 113 - -
Bda07g00314 211 MobiDBLite consensus disorder prediction 179 211 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00314 Bda-Chr7:4206083 Bda09g00524 Bda-Chr9:6930674 3.36E-94 dispersed
Bda02g00518 Bda-Chr2:46061727 Bda07g00314 Bda-Chr7:4206083 2.97E-33 transposed
Bda15g00895 Bda-Chr15:14645656 Bda07g00314 Bda-Chr7:4206083 1.38E-29 transposed
Bda07g00314 Bda-Chr7:4206083 Bda09g00521 Bda-Chr9:6849162 2.00E-91 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16093 PF00847 AP2 2.10E-15 CL0081 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00314 K09286 - zju:107432496 197.978