Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda07g00321 | GAAAAAGTCGGGCTGGGAACATCTGATACAGACTCCGGAAAAGGAAAGAGCAAGAAGTTGAAGAACATAACGCATGGATTTCATTTGGTCAAGGGAAAGTCACATCACGCCATGGAAGATTATGTCGTTGCAGAGTTTAAGCAAGTTGGTGAGAAAGAACTCGGTTTATTCGCAATTTTTGACGGCCATTTAAGTCACAACATTCCTAACTATTTACAGACGCATTTATTCGAGAATATCCTAAATGAGCCTGATTTTTGGACCAAACCAGCCAACGCAGTCAAGAAAGCGTATAGCGAAACAGATGCAATCATTCTGGACGAGGCAGTGGACTTAGGCAGAGGAGGATCTACTGCTGTTACGGCTATACTGATCAATGGTCGTAAGCTGGTCGTAGCCAATATTGGAGATTCTCGTGCAGTTATCTGTACAAATGGGGTGGCCACTCAATTATCAGTCGATCACGAGCCAACTGTGGAAAAACATATGATTGAGAGTAGAGGTGGTTTCGTGTCGAACTTTCCAGGAGACGTAGCTCGAGTCGATGGGCAGCTTGCAGTGGCCAGAGCGTTTGGTGATAAAAGCTTGAAGAAACATCTGAGTTCCGACCCTGATGTGGTAGAGGTAATGGTCGAGGACGGGACCGAGTTCATTATATTGGCAAGTGACGGATTATGGAAGGTGATGTCGAACCAGGAGGCAGCGGACTCGATCAAGCATGTCAAGGATGCTAGAGCGGCAGCCAAGCAACTGACGGATGAGGCTCTGAAAAGGAAGAGCACGGATGATATTTCATGTATAGTTGTGAGATTTCAGTGA | 819 | 45.79 | EKVGLGTSDTDSGKGKSKKLKNITHGFHLVKGKSHHAMEDYVVAEFKQVGEKELGLFAIFDGHLSHNIPNYLQTHLFENILNEPDFWTKPANAVKKAYSETDAIILDEAVDLGRGGSTAVTAILINGRKLVVANIGDSRAVICTNGVATQLSVDHEPTVEKHMIESRGGFVSNFPGDVARVDGQLAVARAFGDKSLKKHLSSDPDVVEVMVEDGTEFIILASDGLWKVMSNQEAADSIKHVKDARAAAKQLTDEALKRKSTDDISCIVVRFQ | 272 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 4251434 | 4252837 | + | Bda025405.1 | Bda07g00321 | 9211 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda07g00321 | 272 | Pfam | Protein phosphatase 2C | 35 | 264 | IPR001932 | - | |
| Bda07g00321 | 272 | SMART | PP2C_4 | 14 | 269 | IPR001932 | - | |
| Bda07g00321 | 272 | ProSiteProfiles | PPM-type phosphatase domain profile. | 24 | 271 | IPR001932 | - | |
| Bda07g00321 | 272 | PANTHER | PROTEIN PHOSPHATASE 2C 39-RELATED | 1 | 272 | - | - | |
| Bda07g00321 | 272 | CDD | PP2Cc | 31 | 271 | IPR001932 | - | |
| Bda07g00321 | 272 | SUPERFAMILY | PP2C-like | 20 | 271 | IPR036457 | - | |
| Bda07g00321 | 272 | PANTHER | PROTEIN PHOSPHATASE 2C | 1 | 272 | IPR015655 | GO:0004722|GO:0006470 | |
| Bda07g00321 | 272 | Gene3D | - | 18 | 272 | IPR036457 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda02g00423 | Bda-Chr2:44850562 | Bda07g00321 | Bda-Chr7:4251434 | 2.67E-127 | dispersed | |
| Bda07g00321 | Bda-Chr7:4251434 | Bda09g01017 | Bda-Chr9:40189384 | 7.89E-117 | dispersed | |
| Bda08g00372 | Bda-Chr8:3807556 | Bda07g00321 | Bda-Chr7:4251434 | 5.23E-36 | transposed | |
| Bda08g00996 | Bda-Chr8:20526633 | Bda07g00321 | Bda-Chr7:4251434 | 1.11E-32 | transposed | |
| Bda14g00766 | Bda-Chr14:5849543 | Bda07g00321 | Bda-Chr7:4251434 | 5.51E-91 | transposed | |
| Bda07g00321 | Bda-Chr7:4251434 | Bda09g00516 | Bda-Chr9:6826972 | 3.35E-169 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda07g00321 | K17506 | - | qsu:112032877 | 423.705 |