Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00332 ATGGACTCCCACCAGCTCTTCGGGTACTCATCATCTTCTCCAAACGTCCCAAGTAGAGTGCTCAGCTCTTTGAATTACAACGTTGGAAACTTTCCCAATTCTTCCTTTTTATCTCATATCGATTCAGATTCTATTACAAACTTGAGTGATAGTCAAGAGCAAAGCTCAACTGAAAATCTTTCTGGAGTCAGCCCTTCGTGTAACTCTTCGATCGACACGAACAGCTGTTTCCTCCCCATCAGCGATTCACCAGATTACTGCCAAGAGAGTCCACTGCTTTATCTTGGTGCGGCTGAGTTTTCACAGGATGTGAGCTCGATCCAAAACATAAGCCACGCTTTACAAGAATTAGAGACTGCTCTTATGGGACCCGACGAAGAGAAAGACGAAATCAGCAAACCAAATGCTTCTTTTGGGGAAGTTAGTAGATCTCAAAACCTGGGGCAGGGATCGATGTTATGGAGCCAAGATTGCCATGATTCACCCGCTATCCTTTCTCAGCCTTCGTTCGTCTCTCGACGCAGGCAGACAGACGAAGTGGTCCGTACTGAGAAACGACATAAGTCAATGGAGGAAGACTCTTTGCAGGGATTTCCATCTGACAATTTGAAGCAACTACTGATTGCTTGTGCCAAAGCTCTAGCAGAGAATAACTTGGCCAATTTTGACAAGTTGGTTGAGAAGGCAAGAAGTGCTGTCTCGATAAGTGGAAATCCAATGCAAAGACTCGGAGCTTATATGGTAGAAGGACTTGTTGCAAGGAAGGAGGAATCGGGTGCTAATATCTACCATGCCCTTAAGTGCAGGGAGCCGGAAAGTAGTGATTTGTTATCATACATGCACATTCTTTATGAAATTTGCCCTTATTTGAAATTTGGTTACATGGCTGCCAATGGAGCCATTGCAGAAGCTTGCAAGAATGAAGATTGCATCCATATAATAGACTTTCAGATTGCTCAAGGGACCCAGTGGATGACTCTCCTTCAAGCACTTGCGGCCAGACCTGGTGGGCCACCCTGCGTGAGGATTACTGGTATCGATGACCCTGTTTCTAAATATGCTCGAGGGGGCGGATTAGAGGCGGTGGGAAGGAGATTGGCTAACATATCGGAAAATTTTCAGATCCAAGTAGAGTTTCAAGGAGTGCCCGTTTTTGCTCCAAATGTCACCCTTGACATGCTCGATGTAAGGCCAGGGGAGGCTCTAGCCGTGAATTTCCCTCTGCAACTCCATCACACCCCAGACGAGAGCGTTGATGTGCGTAATCCTCGAGATGAGCTCTTAAGAACCATCAAATCACTCTCTCCCAAAGTTGTCACATTGGTCGAGCAAGAATCGAACACAAACACGACGCCTTTCCTCTACAGGTTTGTCGAAGCGCTCGAGTATTATTTGGCCATGTTTGAGTCGATCGATGTTACTCTTCCAAGAAATAGCAAGCAGCGTATAAACGTGGAGCAGCATTGTATAGCACGAGATATCGTTAATGTCATCGCTTGTGAGGGGACTGAAAGGGTAGAGCGGCACGAGCTCTTTGGGAAATGGAAGTCGAGGTTGACGATGGCCGGATTTAAGCAGTTTCCATTGAGCTCTTATGTGAATTCTGTCATAAGGAGCTTACTAAAGTGCTATTCAGAGCATTACACGCTGGTCGAAAAAGACGATGCCATGCTGTTGGGTTGGAAGGAAAGGAACCTTATATCTGCATCGGCTTGGTACTGA 1722 46.05 MDSHQLFGYSSSSPNVPSRVLSSLNYNVGNFPNSSFLSHIDSDSITNLSDSQEQSSTENLSGVSPSCNSSIDTNSCFLPISDSPDYCQESPLLYLGAAEFSQDVSSIQNISHALQELETALMGPDEEKDEISKPNASFGEVSRSQNLGQGSMLWSQDCHDSPAILSQPSFVSRRRQTDEVVRTEKRHKSMEEDSLQGFPSDNLKQLLIACAKALAENNLANFDKLVEKARSAVSISGNPMQRLGAYMVEGLVARKEESGANIYHALKCREPESSDLLSYMHILYEICPYLKFGYMAANGAIAEACKNEDCIHIIDFQIAQGTQWMTLLQALAARPGGPPCVRITGIDDPVSKYARGGGLEAVGRRLANISENFQIQVEFQGVPVFAPNVTLDMLDVRPGEALAVNFPLQLHHTPDESVDVRNPRDELLRTIKSLSPKVVTLVEQESNTNTTPFLYRFVEALEYYLAMFESIDVTLPRNSKQRINVEQHCIARDIVNVIACEGTERVERHELFGKWKSRLTMAGFKQFPLSSYVNSVIRSLLKCYSEHYTLVEKDDAMLLGWKERNLISASAWY 573
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4419946 4421667 - Bda025418.1 Bda07g00332 9222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00332 573 MobiDBLite consensus disorder prediction 175 195 - -
Bda07g00332 573 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 11 572 IPR005202 -
Bda07g00332 573 Coils Coil 212 232 - -
Bda07g00332 573 MobiDBLite consensus disorder prediction 175 194 - -
Bda07g00332 573 PANTHER CHITIN-INDUCIBLE GIBBERELLIN-RESPONSIVE PROTEIN 1 11 572 - -
Bda07g00332 573 MobiDBLite consensus disorder prediction 47 67 - -
Bda07g00332 573 Pfam GRAS domain family 203 572 IPR005202 -
Bda07g00332 573 ProSiteProfiles GRAS family profile. 194 573 IPR005202 -
Bda07g00332 573 Coils Coil 173 193 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00027 Bda-Chr3:453384 Bda07g00332 Bda-Chr7:4419946 1.39E-139 dispersed
Bda07g00332 Bda-Chr7:4419946 Bda09g01581 Bda-Chr9:47274577 1.19E-162 dispersed
Bda07g00579 Bda-Chr7:7142356 Bda07g00332 Bda-Chr7:4419946 5.70E-30 dispersed
Bda11g01470 Bda-Chr11:21095973 Bda07g00332 Bda-Chr7:4419946 1.90E-40 dispersed
Bda15g00942 Bda-Chr15:17313482 Bda07g00332 Bda-Chr7:4419946 3.23E-51 dispersed
Bda12g00857 Bda-Chr12:38826624 Bda07g00332 Bda-Chr7:4419946 4.91E-09 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16094 PF03514 GRAS 1.50E-131 CL0063 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00332 - - zju:107431716 822.002