Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00334 ATGCCAACTGTGTGGTTCTCACTCAAGAAATCAATGCACTGCAGACCGAAACCCTCGGATGTTCATGATCCTAAATCCAGGAGACATTTGAGCACAATCTTGACCAGAAAAGCAGCACGATATGGCTGTTCGGCGGGAAGATCAGGCTGTTCAAGGTCCATTGCAAATCTCAAAGATGTTATTCATGGGAGTAAAAGACACTTAGAAAAGCCACCTAGTTATAGCCCGAGATCCATTGGAAGCAGCGAGTTTCTCAATCCAATTACTCACGAAGTAATTTTGAGTAACTCAAAATGTGAGCTCAAAATTTCTGGCTTTGAAGTTGCAGGAAAAGGCGACCCCAGAGCTAGTTCGACGTTTGTAGGCAATTTAAGACCGGGGACGCCAGGACCAGGGGGAAATCTAGCAATGCATTATTTTAATCAGTCACTGAGGAACTCGTCATCTTCTTCACGGAAGTTTCCATTTCATGTATCAGAAAGAGAAGGGGGTGGAGCTGCGGATTCTGAGAAATTTGGAAGTAGTAGAATTTACTGTGGTAATCGAACTTCATTGGAGATAGATTCTAATGGAAATGGAAATGAATTTTCTAGAATTAGTTGTCATAAATGTGGAGAGCAGTTCACCAAATGGGAAGCGGCTGAAGAACATCATCTATCCAATCATGCTGTAACCGAGCTTGTGGAAGGCGATTCATCAAGGAAAATCGTCGAAATCATATGCCAAACAAGCTTACTGAAATCTGAAAATCAAAGTAGCAGAATCGAAAGAGTTCTTAAAGTCCACAACATGCAAAAGACTCTCACTCAATTCGAAGACTATAGAGAATTGGTGAAGATCAAAGCCAGTAAGCTCCAGAAGAAACACCCTCGGTGCCTAGCCGATGGGAACGAGCTGCTGAGGTTTCACGCCACGATCTTGGCCTGCTCGCTCGGTCACGGATCCTCCAGTCTTTGCCGATCGGAGAAATGCTGTGTTTGTCGAATTATACGAAATGGATTTTTGGAGAAGGAGATGAAGGAAGGAATCGGAGTTTTCACGACTTCGACGAGTGAGAGAGCGTTGGAATCGATAGAAATAGTTGAAGAGAACTCGTCTCTGAGGAAAGCTTTGATTGTTTGCAGAGTTGTTGCAGGGAGAGTGCATAGGCCATTGGAGAATATTCAAGAAATTTCTGGGCAAACTGGGTTTGATTCATTGGCTGGGAAAGTGGGTTTGTATTCAAATATTGAAGAACTTTACTTGTTGAATCCTAAAGCTCTTCTTCCTTGCTTCGTTGTCATCTGCAAAGCCTAG 1296 43.21 MPTVWFSLKKSMHCRPKPSDVHDPKSRRHLSTILTRKAARYGCSAGRSGCSRSIANLKDVIHGSKRHLEKPPSYSPRSIGSSEFLNPITHEVILSNSKCELKISGFEVAGKGDPRASSTFVGNLRPGTPGPGGNLAMHYFNQSLRNSSSSSRKFPFHVSEREGGGAADSEKFGSSRIYCGNRTSLEIDSNGNGNEFSRISCHKCGEQFTKWEAAEEHHLSNHAVTELVEGDSSRKIVEIICQTSLLKSENQSSRIERVLKVHNMQKTLTQFEDYRELVKIKASKLQKKHPRCLADGNELLRFHATILACSLGHGSSSLCRSEKCCVCRIIRNGFLEKEMKEGIGVFTTSTSERALESIEIVEENSSLRKALIVCRVVAGRVHRPLENIQEISGQTGFDSLAGKVGLYSNIEELYLLNPKALLPCFVVICKA 431
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4435105 4436768 - Bda025420.1 Bda07g00334 9224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00334 431 Gene3D - 223 430 - -
Bda07g00334 431 MobiDBLite consensus disorder prediction 151 170 - -
Bda07g00334 431 ProSitePatterns Zinc finger C2H2 type domain signature. 201 222 IPR013087 -
Bda07g00334 431 PANTHER - 2 431 - -
Bda07g00334 431 SUPERFAMILY ADP-ribosylation 224 430 - -
Bda07g00334 431 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 431 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda07g00334 Bda12g00882 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00334 Bda-Chr7:4435105 Bda08g01222 Bda-Chr8:50076592 9.44E-61 dispersed
Bda12g00882 Bda-Chr12:39556224 Bda07g00334 Bda-Chr7:4435105 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16095 None None None None Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00334 - - twl:119985289 630.943