Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00354 ATGATCAACATTTACATTGCAGCCTTCATCTTCATAATCCCCATTTTCCTACTTCTTACCGGAAGAACCAAATCATCCCAAAGGCTCCCTCCTGGCTCACTTGGAATTCCCTACATAGGCCAGAGCATTAGCTTTCTCCAAGCCATGAGAAAAAACACAGCAGAACAATGGCTGCAACAAAGGATCACAAAGTATGGACCAGTCTCCAAGCTCAGTCTCTTCGGTAAACCCACTGTTTTCATCAGCGGACAGGCCGCCAATAAGTTCATTTTCACCAGTGACTATACCACCCTCAGTAACCAACAAATCAAGTCCGCCAGGACGATCATAGGCGACCACAACTTATTCGAGCTTAGCGGCGAAGATCATAAACGTGTTAGAGGCGCCCTCCTTTCGTTCCTGAAGCCGGATTCATTGAAAAAGTATATCGGCATGATGGACGAGGAAGTAAGGGAGCATCTCAAGATCCATTGGCAGGGACAGCAAGAAGTTTCTGTCTTGCCGTTGATGAAGACGCTCACGTTCAACGTGATTTGCTCTCTTCTGTTCGGAATCGAGAAAGGAATCACTAGAGATAAGTACATGGTCTGCTTTCAAACGATGATGAAAGGAGTGTGGGCAGTGCCGATCGACTTGCCGTTCACTCGATACAGTCGGGGCCTGCGGGAGAGTAGACGGGTGCAAGGGATGTTGAAGGAACTTATCGACGAGAAGAGAGTAAAACTCGAAAAGGAGGTCGATTCTCAACATCAAGACCTGATTTCTCACTTGATTAGCATTCAAAAAGAAAGTGGCAAAGACGGAATAAGCGAGAAGGAAATCGTGCACAATGCTGTGATTGTCATGATAGCAGGATATGACACGACTTCTGCGCTGCTCACTTTCATGATGAGGCTGCTGGCTAATGATCCTGCTGTTTATGCAGCTGTTCTTCAAGGTAGAACCACAAAACTCAAATCTAAACTAGATATCTTAAAATTCAACTTCACAAGTCCTGCAAAGTGA 1005 45.57 MINIYIAAFIFIIPIFLLLTGRTKSSQRLPPGSLGIPYIGQSISFLQAMRKNTAEQWLQQRITKYGPVSKLSLFGKPTVFISGQAANKFIFTSDYTTLSNQQIKSARTIIGDHNLFELSGEDHKRVRGALLSFLKPDSLKKYIGMMDEEVREHLKIHWQGQQEVSVLPLMKTLTFNVICSLLFGIEKGITRDKYMVCFQTMMKGVWAVPIDLPFTRYSRGLRESRRVQGMLKELIDEKRVKLEKEVDSQHQDLISHLISIQKESGKDGISEKEIVHNAVIVMIAGYDTTSALLTFMMRLLANDPAVYAAVLQGRTTKLKSKLDILKFNFTSPAK 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4555899 4556979 - Bda025439.1 Bda07g00354 9244

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00354 334 PRINTS E-class P450 group I signature 173 191 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda07g00354 334 PRINTS E-class P450 group I signature 273 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda07g00354 334 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda07g00354 334 PANTHER CYTOCHROME P450 26 10 323 - -
Bda07g00354 334 PANTHER OS07G0520300 PROTEIN 10 323 - -
Bda07g00354 334 SUPERFAMILY Cytochrome P450 25 312 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda07g00354 334 Pfam Cytochrome P450 30 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda07g00354 334 Gene3D Cytochrome P450 20 323 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00354 - - - tcc:18593563 418.698
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bda07g00354 Bda09g00395 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00354 Bda-Chr7:4555899 Bda07g00357 Bda-Chr7:4578678 0 dispersed
Bda07g00354 Bda-Chr7:4555899 Bda07g00355 Bda-Chr7:4561025 0 tandem
Bda07g00354 Bda-Chr7:4555899 Bda09g00395 Bda-Chr9:5008364 3.79E-45 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g491 . Blo03g01447 Bda07g00354 Bda09g00395 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi04g01210 . . . . . . . . . Bma07g01303 . . . . . . . . Cpe14g00747 . . . . . . . . Cla05g01497 Cam05g1614 . Cco05g1643 Clacu05g1597 Cmu05g1496 . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002151 6 2 2 2 2 2 1 2 2 2 2 2 1 1 2 1 2 1 1 2 2 5 1 3 2 2 1 2 1 3 60
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda07g00354 Bda_Chr07 FPKM 46.499695 50.984833 25.230211 25.85943 6.576643 8.053905 6.342181 46.458042 46.2677