Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00356 ATGATAAACATTTACATTGCAGCCTTCATCTTCATAATCCCCATTTTCCTACTTCTTACCGGAAGAACCAAATCATCCCAAAGGCTCCCTCCTGGCTCACTTGGAATTCCCTACATAGGCCAGAGCATTAGCTTTCTCCAAGCCATGAGAAAAAACACAGCAGAACAATGGCTGCAACAAAGGATCACAAAGTATGGACCAGTCTCCAAGCTCAGTCTCTTCGGTAAACCCACAGTTTTCATCAGCGGACAGGCTGCCAATAAGTTCGCTTTCACCGGTGACGATACCACCCTCAGTAACCAACAAGTCAAGTCCGTCACAATGATCTTAGGCGACCACAACATATTTGAGCTCAGCGGCGAAGATCATAAACGTGTTAGAGGCGCCCTCCTTTCATTCCTGAAGCCGGATTCGCTGAAAAAGTATATTGGAATAATGGACGGGGAAGTAAGGGAGCATCTCAACACCCATTGGCAGGGACAAAAAGAAGTTTCTGTCATGCCGTTAATGAAGACGCTCACGTTCAACGTGATATGTTCTCTTCTGTTCGGAATCGAGAAAGGAATCACTAGAGATAAGTATATGGACTGCTTTCAAACGATGTTGAAAGGAGTGTGGGCAGTGCCGATCGACTTGCCGTTCACTCGATACAACCGGGGCGTGCGGGAGAGTAGACGGGTGCAAGGGATGTTGAAGGAACTTATCGACGAGAAGAGAGTAAAACTCGAAAAGGAGGTCGATTCTCAGCCTCAAGACCTGATCTCTCACTTGCTTTGCGTTCAAAAGAAAGCGATTTTCTGGGCGACATTGATGACTCACATGGACGGCGACATATTCCCCGAGCCATCGAAGTTCGATCCGAGTAGATTCGAAAGCCAAACATCGATTCCTCGTTTTTGCTTTGCGGCTTTCGGGGGCGGACCGAGAGTCTGTCCTGGCAATGAGTTTGCAAGGATTGAGACTCTTGTTACCATTCATTACCTCATGACTCACTTCACATGGAAGCTCACTGCGGATGATCTTTTCATCAGAGATCCCACGCCAATACCAACTAAAGGATTACCGATCCAAATTACACAAAGGAAACCATTATAA 1095 46.58 MINIYIAAFIFIIPIFLLLTGRTKSSQRLPPGSLGIPYIGQSISFLQAMRKNTAEQWLQQRITKYGPVSKLSLFGKPTVFISGQAANKFAFTGDDTTLSNQQVKSVTMILGDHNIFELSGEDHKRVRGALLSFLKPDSLKKYIGIMDGEVREHLNTHWQGQKEVSVMPLMKTLTFNVICSLLFGIEKGITRDKYMDCFQTMLKGVWAVPIDLPFTRYNRGVRESRRVQGMLKELIDEKRVKLEKEVDSQPQDLISHLLCVQKKAIFWATLMTHMDGDIFPEPSKFDPSRFESQTSIPRFCFAAFGGGPRVCPGNEFARIETLVTIHYLMTHFTWKLTADDLFIRDPTPIPTKGLPIQITQRKPL 364
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4572606 4574358 - Bda025441.1 Bda07g00356 9246

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00356 364 Gene3D Cytochrome P450 20 263 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda07g00356 364 Gene3D Cytochrome P450 264 361 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda07g00356 364 SUPERFAMILY Cytochrome P450 25 361 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda07g00356 364 PANTHER OS07G0520300 PROTEIN 10 261 - -
Bda07g00356 364 PANTHER OS07G0520300 PROTEIN 264 360 - -
Bda07g00356 364 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 304 313 IPR017972 GO:0005506|GO:0016705
Bda07g00356 364 PANTHER CYTOCHROME P450 26 10 261 - -
Bda07g00356 364 PANTHER CYTOCHROME P450 26 264 360 - -
Bda07g00356 364 Pfam Cytochrome P450 268 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda07g00356 364 Pfam Cytochrome P450 30 260 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00356 - - - jre:108983960 345.51
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00356 Bda-Chr7:4572606 Bda09g00396 Bda-Chr9:5010874 3.47E-58 dispersed
Bda07g00355 Bda-Chr7:4561025 Bda07g00356 Bda-Chr7:4572606 1.02E-63 tandem
Bda07g00356 Bda-Chr7:4572606 Bda07g00357 Bda-Chr7:4578678 3.08E-67 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g493 Blo03g00567 . Bda07g00356 . . Bpe08g01128 . . . . . . . . . . . Bhi09g01888 . . . . . . . . . . . . . . . . . Lsi04g01209 . . . . . . . . . Bma07g01302 . . . . . . . . . . . . . . . . . Cla05g01495 Cam05g1612 . Cco05g1641 Clacu05g1593 Cmu05g1495 . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002151 6 2 2 2 2 2 1 2 2 2 2 2 1 1 2 1 2 1 1 2 2 5 1 3 2 2 1 2 1 3 60
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda07g00356 Bda_Chr07 FPKM 6.3 5.122059 10.958442 10.885088 36.21743 29.291273 35.220634 10.234707 9.724187