Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00360 ATGAGCGTGGTGGGGTTTGATATTGGCAATGAGAATTGTGTTATAGCTGTGGTGAAGAAACGAGGTATTGATGTTTTGCTAAATGATGAATCAAAACGGGAAACCCCAGCAGTTGTATGCTTTGGCGAGAAGCAGCGATTTCTGGGATCTGCAGGAGCTGCATCTGCAATGATGAATCCAAAATCAACAATATCTCAGGTGAAGAGACTCACTGGCCGGAGGTTTAATGACCCTGGCATCCAAAATGATCTGAAGCTGTTATCTTTTGAAACTTCTGAAGCTTCAGACGGTGGTATATTGATTCACTTGAGATATTTGGGGGAGACTCATACATTTACTCCTGTACAGATTATGGCAATGCTCTTTGCACATTTGAAAGATATAACTGAGAAAAATTTGGAAGCACCCCTTTCAGATTGTGTTATTAGTATTCCGTCATACTTCACTGACGTGCAGAGACGAGCATATCTTAATGCTGCCGCAATTGCTGGTTTAAAATCTTTAAGGCTTATGCATGATTGTACTGCAACTGCACTTACCTATGGAATTTATAAAACAGACTATTCTACCACAGGCATATCCTATGCTGCTTTTGTTGATATTGGTCATTGTGACACTCAAGTCTGTATAGTCTCATTTGCGACTGGACATATGAAAATATTGTCTCATACTTTTGATGCAAACTTGGGAGGGAGAGACTTTGATGAGGTTTTGTTTAGTTACTTTGCAACGAAATTCCAGGAGCAGTATAATATTGACGTGAATTCAAATGTCAAGGCAGGTATTCGGCTGCGGGCTGCCTGTGAGAAGGTGAAGAAAGTTTTAAGTGCAAATCTAGAGGCACCTCTAAACATTGAGTGCTTGATGGATGAGAAAGATGTCAAGGGTTTCATTAAGAGGGAAGAATTTGAGAAGCTAGCTTCTGGATTGTTGGAGAGAATTAGCATTCCTTGTCATAGAGCTTTAGCTGATGCAGGATTGACTGCAGAGAAGATCCATTCTGTTGAGCTTGTTGGATCGGGGTCTAGGATTCCGGCTATTTCTAGATTATTAACTATACTCTTTAAGAGAGAGCCCAGTCGGACACTAAATGCTAGTGAATGTGTAGCTCGTGGATGTGCTTTACAGTGTGCGATGCTAAGCCCAATTTTCCGAGTCAGAGATTATGAGGTTGAAGATTCAATTCCTTTCTCTATTGGGTTCTCATCAGATGGAGGCCCAATTAGCATCGGCTCAAATGGGATATTGTTTCCTAAAGGCCAATCCATTCCATGCAGTAAAGTTTTGTCATTTCAACGGGGGCCTTTATTTCATTTAGAAGCATACTATGCTGATCCAGAAGAACTGCCAGCTGATATGCCTTCAAAAATATGTTATTACACAGTGGGTCCTTTACAAGGTTACCATAATGAGAAGGCAAAGATTAAAGTTAGAGTTCAGCTAAATCTCCATGGGATTGTTGCTGTTGATTCAGCTACTTTAATAGAAGATATTGAAGAAGATTCAGAGTGTAATCCTGCTTCAGGTAATTTTGAGATTGATGCAGTTGATGGTGATGAAAACAACATTGGTCAGTCCAAAGTTTCGCATTCTTCGAATCGCAAGGTATTGCAGGTCAATGCTATGAAAAAAGGTAAGATGTCCAAGAGGATTGAGATACCTATTAGTGAGCACATATATGGTGGAATGACCCAGGCAGAATTTTCAGAAGCCCAAGAGAGAGAACTTCAGCTTGCCCAACAAGACAAGACAATTGAACAAACCAAAAACAAAAAAAATGCATTGGAGTCATATGTCTATGAAATGCGGAATAAGCTTTTCAACACATATCGGAGTTTTGCGACTGACGAAGAGAGGGAGGAAATCTCCACAAGCCTTCAACAGACAGAGGAGTGGCTTTATGAGGATGGAGATGATGAAACTGAAAGTACTTATACTTCAAAGTTGGAGAATCTTAAGAAGTTGGTAGATCCTATTGAAGATCGATATAGAGATGAAGAAGCGCGAGGGCAAGCTGCCAATGCCCTGTCAAAATGTATATTGGAATATCGAAAGGCTGCAGATTCACTCCCCCCCAAGGACAAGGAAATGATCATGGAGGAGTGTGATAAAGCGGAGCAGTGGCTCAGCGAGAGAACCAACCAACAAGATTTGATGCCAAAAAACGCAGACCCAATCTTATGGTCAAGTGATATCAAAAGCCGGGAAGAGAATTTGGATGGGTACTAG 2229 40.92 MSVVGFDIGNENCVIAVVKKRGIDVLLNDESKRETPAVVCFGEKQRFLGSAGAASAMMNPKSTISQVKRLTGRRFNDPGIQNDLKLLSFETSEASDGGILIHLRYLGETHTFTPVQIMAMLFAHLKDITEKNLEAPLSDCVISIPSYFTDVQRRAYLNAAAIAGLKSLRLMHDCTATALTYGIYKTDYSTTGISYAAFVDIGHCDTQVCIVSFATGHMKILSHTFDANLGGRDFDEVLFSYFATKFQEQYNIDVNSNVKAGIRLRAACEKVKKVLSANLEAPLNIECLMDEKDVKGFIKREEFEKLASGLLERISIPCHRALADAGLTAEKIHSVELVGSGSRIPAISRLLTILFKREPSRTLNASECVARGCALQCAMLSPIFRVRDYEVEDSIPFSIGFSSDGGPISIGSNGILFPKGQSIPCSKVLSFQRGPLFHLEAYYADPEELPADMPSKICYYTVGPLQGYHNEKAKIKVRVQLNLHGIVAVDSATLIEDIEEDSECNPASGNFEIDAVDGDENNIGQSKVSHSSNRKVLQVNAMKKGKMSKRIEIPISEHIYGGMTQAEFSEAQERELQLAQQDKTIEQTKNKKNALESYVYEMRNKLFNTYRSFATDEEREEISTSLQQTEEWLYEDGDDETESTYTSKLENLKKLVDPIEDRYRDEEARGQAANALSKCILEYRKAADSLPPKDKEMIMEECDKAEQWLSERTNQQDLMPKNADPILWSSDIKSREENLDGY 742
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4596074 4599922 + Bda025445.1 Bda07g00360 9250

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00360 742 PANTHER HEAT SHOCK 70 KDA PROTEIN 16 1 740 - -
Bda07g00360 742 PRINTS 70kDa heat shock protein signature 30 42 - -
Bda07g00360 742 PRINTS 70kDa heat shock protein signature 2 15 - -
Bda07g00360 742 PRINTS 70kDa heat shock protein signature 388 407 - -
Bda07g00360 742 PRINTS 70kDa heat shock protein signature 332 348 - -
Bda07g00360 742 PRINTS 70kDa heat shock protein signature 363 383 - -
Bda07g00360 742 PRINTS 70kDa heat shock protein signature 472 488 - -
Bda07g00360 742 PRINTS 70kDa heat shock protein signature 140 160 - -
Bda07g00360 742 CDD HSPA4_like_NDB 2 381 - -
Bda07g00360 742 Coils Coil 649 669 - -
Bda07g00360 742 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 596 IPR029047 -
Bda07g00360 742 Coils Coil 571 598 - -
Bda07g00360 742 SUPERFAMILY Actin-like ATPase domain 196 380 IPR043129 -
Bda07g00360 742 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 566 663 IPR029048 -
Bda07g00360 742 Gene3D Actin; Chain A, domain 4 230 313 - -
Bda07g00360 742 Gene3D - 563 675 IPR029048 -
Bda07g00360 742 Gene3D - 5 374 - -
Bda07g00360 742 Gene3D - 186 360 - -
Bda07g00360 742 PANTHER HSC70CB, ISOFORM G-RELATED 1 740 - -
Bda07g00360 742 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Bda07g00360 742 Pfam Hsp70 protein 3 663 IPR013126 GO:0005524|GO:0140662
Bda07g00360 742 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 385 510 IPR029047 -
Bda07g00360 742 Gene3D - 38 113 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00360 K09489 HSPA4; heat shock 70kDa protein 4 - jre:108983997 1072.38
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00857 Bda-Chr4:58414849 Bda07g00360 Bda-Chr7:4596074 0 dispersed
Bda07g00208 Bda-Chr7:2456194 Bda07g00360 Bda-Chr7:4596074 2.20E-56 dispersed
Bda07g00360 Bda-Chr7:4596074 Bda06g01222 Bda-Chr6:42165182 1.21E-81 dispersed
Bda09g00581 Bda-Chr9:8198133 Bda07g00360 Bda-Chr7:4596074 2.94E-70 dispersed
Bda07g00360 Bda-Chr7:4596074 Bda10g00807 Bda-Chr10:42455306 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g507 Blo03g00559 . Bda07g00360 . . . . . . . Cma01g01133 Cma09g00950 . Car09g00863 . Cpe06g00765 Cpe02g00768 . . . . . . . . . . . . . . . . Cone14ag1142 Cone15ag1160 Lsi04g01203 . . . . . . . Bpe11g00547 . . Bma14g00339 . Cmo01g01184 Cmo09g00948 . . . Car16g00544 . . . . . . . . . Cla05g01487 . Cec05g1613 . Clacu05g1583 Cmu05g1486 . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004049 1 5 1 1 1 1 2 3 1 1 1 1 2 1 1 2 1 2 2 2 1 1 1 1 1 1 1 3 2 0 44
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda07g00360 Bda_Chr07 FPKM 10.153513 12.774826 7.067452 6.859059 10.785147 14.241822 10.269056 2.803057 3.699399