Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda07g00367 | ATGACTTCAGCTCAAGATCCATTCTACGTTGTTAAGGATGAAATCCAAGAATCTATTGACAAGTTGCAATCAACTTTTCATCGATGGGAGCGTATTTCTGATACAGGAGATAGAGTGCATCTCACAAATGAGCTGCTTGCTAGTTGTGACAGCATCGAGTGGCAGGCCTGCTTTCTTGATAGGAAGGTGGATGAATTAGACAAGGCTATAGCTGTTGCAGCCAGAGATCTGGCTTGGTATGGCATTGAAGAAGAAGAGCTTGAAAAACGAAAGAGATGGACTAGCACAGCTCGTGCTCAGGTTGGCTCTGTGAAAAAGGTTGTGAAAGCTGGAAAGGAGCGCGATGGCATTACAACTACCGCAATGAATATGAATGGGATGCGTCGAGAACTGTTAAGGTTGCCTAATACTCATGAAAGAGATAGGTCAAATCAATACATGATTGGACATAGGCAACAAGACGAGGAATTGGATGAGCTCAGTGCTAGCGTGGAGAGAATCGGAGGAGTTGGACTTACAATACATGACGAACTCCTTGGGCAGGAGAAAATCATCGATGAACTAGGAACAGAAATGGACGCGACATCAAATCGCCTTGATTTTGTTCAGAAAAAGGTAGCTGTGGTCATGAAGAAGGCCGGTATTAAGGGGCAGATGATGATGATTTTGTTTTTAATTGTTTTGTTCATCATCCTCTTTGTGTTGGTCTTCTTAACTTAG | 720 | 43.06 | MTSAQDPFYVVKDEIQESIDKLQSTFHRWERISDTGDRVHLTNELLASCDSIEWQACFLDRKVDELDKAIAVAARDLAWYGIEEEELEKRKRWTSTARAQVGSVKKVVKAGKERDGITTTAMNMNGMRRELLRLPNTHERDRSNQYMIGHRQQDEELDELSASVERIGGVGLTIHDELLGQEKIIDELGTEMDATSNRLDFVQKKVAVVMKKAGIKGQMMMILFLIVLFIILFVLVFLT | 239 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 4669492 | 4672572 | - | Bda025453.1 | Bda07g00367 | 9257 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda07g00367 | 239 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 147 | 209 | IPR000727 | - | |
| Bda07g00367 | 239 | PANTHER | SYNTAXIN-61 | 1 | 238 | - | - | |
| Bda07g00367 | 239 | Gene3D | - | 2 | 111 | - | - | |
| Bda07g00367 | 239 | SMART | tSNARE_6 | 142 | 209 | IPR000727 | - | |
| Bda07g00367 | 239 | CDD | SNARE_Qc | 150 | 207 | - | - | |
| Bda07g00367 | 239 | PANTHER | SYNTAXIN | 1 | 238 | IPR045242 | - | |
| Bda07g00367 | 239 | SUPERFAMILY | t-snare proteins | 5 | 106 | IPR010989 | GO:0016020|GO:0016192 | |
| Bda07g00367 | 239 | Pfam | SNARE domain | 184 | 235 | IPR000727 | - | |
| Bda07g00367 | 239 | Gene3D | - | 154 | 216 | - | - | |
| Bda07g00367 | 239 | SUPERFAMILY | SNARE fusion complex | 147 | 209 | - | - | |
| Bda07g00367 | 239 | Pfam | Syntaxin 6, N-terminal | 6 | 105 | IPR015260 | GO:0016020|GO:0048193 | |
| Bda07g00367 | 239 | Coils | Coil | 185 | 205 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda09g00411 | Bda-Chr9:5111043 | Bda07g00367 | Bda-Chr7:4669492 | 6.63E-08 | dispersed | |
| Bda07g00367 | Bda-Chr7:4669492 | Bda09g00403 | Bda-Chr9:5049766 | 3.07E-135 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda07g00367 | K08500 | - | jre:109005817 | 295.049 |