Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00370 ATGGAGTGGAAAAGAGGGTCTTCGATCGGCCGGGGTTCGTCGGCCACTGTGTACTTAGCGACGGCCTTACCCTCCGGCAAGGCGTTTGCGGTTAAGTCCGGCGAGCTTTCTTCTTCTTCCTCGCTGCGGAAAGAGCAGATATTTTTGTCCGGATTGAGCTCTCCTTACATTGTCAAATACTTGGGTTTTGATGTAAGTGATGAAAACAGAGTGCCCATGTTCAATCTTTTCATGGAATACGAACCGGGTGGCTCTCTCTCCGACGCGATTCGCCGGCACGGCGGTCGATTGGACGAGGGACTGATCAGATCCTACACTAGGCAGATTTTGCGTGGTTTGGATTATCTTCACGATTATGGGTTTGCGCATTGCGATATAAAGAGTGAAAATATATTGGTGGGTAAAGAAGGGGTGAAAATTGCTGATTTGGGTTGTGCTAAATTGGTGGAGAAAGTCACCGAAAAAGCTTCTTTTGGCGGTACACCGACTTTCATGGCACCGGAAGTCGCGCGCGGTGAAGAACAAGGATTTGAAGCCGACGTGTGGGCCCTTGGCTGTACTTTGATCGAGATGGCAACAGGTAAACATCCATGGCTGGACAGATGTGGTGATCCGGTATCAATTCTTCACAGAATCGGGTTTTCCAGCGAATTGCCATTCTTTCCGAGCTGGTTTTCCGATGAGGGTAAGGATTTTTTGAGCAAGTGTTTGAAGAGAGATTCAAAAGAGCGATGGACGGCTAAGAAACTGCTTGAACATCCATTTCTGGATGAACAGAGCTCAGATTCAATTACAGGAAAGCAAAGTCCAGCAAATTTCACAAATTCTCCGAATGGTGTTTTGGAGAAAGGTATTTTCGATTCAGTCGAAGTATTAGAAAGTCCTCTAAATCTAACCCAGCAAAGCTCCTCGACGAGTTCTCCGTTTGAAAGGATAAACAATTTGGTCGGAAAATCGTTTCCCGGGGAAAAATTTCCGGCCAGTTGGACGTTGGACGACGATTGGATCTCAGTCAGAAGCAACATCAACAACGAAACAGTCGATTTATCTGACGAAAACGACATGGTCATGATCTATGAAACCGGAAGTACGAGTATGACAGAAACTTCTTCAGATATTCAAGAAGAAGATAGTGAAATTGAAGAACTTAATCAAAACTTAAGAACCACGCAGATTGAATTTGCAGACGTTGAATTCGAATTTGTCTCAGTGAATGTAAAACTTGAAACAGATAATGAGAATTTTTTGCTACCCATAACCCATTCTCTTTTTCCATTATTAACTTTCTTAACTTCTATCTTCTGCCATTAA 1311 44.01 MEWKRGSSIGRGSSATVYLATALPSGKAFAVKSGELSSSSSLRKEQIFLSGLSSPYIVKYLGFDVSDENRVPMFNLFMEYEPGGSLSDAIRRHGGRLDEGLIRSYTRQILRGLDYLHDYGFAHCDIKSENILVGKEGVKIADLGCAKLVEKVTEKASFGGTPTFMAPEVARGEEQGFEADVWALGCTLIEMATGKHPWLDRCGDPVSILHRIGFSSELPFFPSWFSDEGKDFLSKCLKRDSKERWTAKKLLEHPFLDEQSSDSITGKQSPANFTNSPNGVLEKGIFDSVEVLESPLNLTQQSSSTSSPFERINNLVGKSFPGEKFPASWTLDDDWISVRSNINNETVDLSDENDMVMIYETGSTSMTETSSDIQEEDSEIEELNQNLRTTQIEFADVEFEFVSVNVKLETDNENFLLPITHSLFPLLTFLTSIFCH 436
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4701774 4703084 - Bda025456.1 Bda07g00370 9260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00370 436 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 15 1 363 - -
Bda07g00370 436 SMART serkin_6 3 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g00370 436 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 363 - -
Bda07g00370 436 CDD STKc_MAPKKK 2 256 - -
Bda07g00370 436 Coils Coil 366 400 - -
Bda07g00370 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Bda07g00370 436 SUPERFAMILY Protein kinase-like (PK-like) 3 310 IPR011009 -
Bda07g00370 436 Pfam Protein kinase domain 4 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g00370 436 ProSiteProfiles Protein kinase domain profile. 3 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g00370 436 Coils Coil 435 436 - -
Bda07g00370 436 Gene3D Transferase(Phosphotransferase) domain 1 2 314 - -
Bda07g00370 436 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00370 Bda-Chr7:4701774 Bda15g00951 Bda-Chr15:17553037 5.00E-99 dispersed
Bda07g00370 Bda-Chr7:4701774 Bda06g00375 Bda-Chr6:5954371 4.96E-106 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69702 PF00069 Pkinase 2.30E-57 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00370 K20716 - jre:108983203 407.912