Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00381 ATGGCGTCCTCTTCGGATTCATGGGTAAAGGAATATAACGAAGCAGTTAAGCTTGCTGATGATATCAATGGCATGATCTCTGAGCGGACTTCGGTTTCTGTATCCGGGCCAGAAGCTCAGCGCTATGCCTCCACTATTCGCAGAAAGATCACAATATTGGGGACTAGACTTGATAGCTTACTAGCACTCTTACCTAAACTTCCTGGAAAGCAGCCCATCTCTGATAAAGAGATGAATCGCCGAAGGGACATGGTTACAAATTTAAGAACAAAGGTTACCCAAATGGCTTCACAACTGAACATGTCGAACTTTGCCAATCGTGACAGCTTGCTTGGTCCTGAAATTAAAGCAGCTGATCCCATGAACAGAACTGTGGGCCTGGACAACCAAGGTCTAGTTGGTCTTCAGCGACAAATTATGAGAGAGCAAGATGACGATCTTCAGAAGCTGGAGGAGACTGTAATAAGTACAAAACATATTGCTCTGGCAGTCAACGAAGAACTGGACCTGCATTCGAGACTAATTGATGACTTGGACCAACATGTAGATGTTACCGACTCTCGATTACGGGTAATTCTCTCTTCATGA 588 44.56 MASSSDSWVKEYNEAVKLADDINGMISERTSVSVSGPEAQRYASTIRRKITILGTRLDSLLALLPKLPGKQPISDKEMNRRRDMVTNLRTKVTQMASQLNMSNFANRDSLLGPEIKAADPMNRTVGLDNQGLVGLQRQIMREQDDDLQKLEETVISTKHIALAVNEELDLHSRLIDDLDQHVDVTDSRLRVILSS 195
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 4808229 4809673 + Bda025466.1 Bda07g00381 9271
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00381 195 PANTHER SYNTAXIN 1 192 IPR045242 -
Bda07g00381 195 Gene3D - 139 194 - -
Bda07g00381 195 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 137 195 IPR000727 -
Bda07g00381 195 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 1 192 - -
Bda07g00381 195 SUPERFAMILY t-snare proteins 19 100 IPR010989 GO:0016020|GO:0016192
Bda07g00381 195 SUPERFAMILY SNARE fusion complex 128 191 - -
Bda07g00381 195 CDD SNARE_Qc 140 190 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Bda05g00693 Bda07g00381 CCT
Bda07g00381 Bda09g00411 BCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00693 Bda-Chr5:55214811 Bda07g00381 Bda-Chr7:4808229 2.34E-98 dispersed
Bda07g00381 Bda-Chr7:4808229 Bda09g00411 Bda-Chr9:5111043 1.24E-128 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00381 K08503 - pvy:116145238 316.62