Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda07g00381 | ATGGCGTCCTCTTCGGATTCATGGGTAAAGGAATATAACGAAGCAGTTAAGCTTGCTGATGATATCAATGGCATGATCTCTGAGCGGACTTCGGTTTCTGTATCCGGGCCAGAAGCTCAGCGCTATGCCTCCACTATTCGCAGAAAGATCACAATATTGGGGACTAGACTTGATAGCTTACTAGCACTCTTACCTAAACTTCCTGGAAAGCAGCCCATCTCTGATAAAGAGATGAATCGCCGAAGGGACATGGTTACAAATTTAAGAACAAAGGTTACCCAAATGGCTTCACAACTGAACATGTCGAACTTTGCCAATCGTGACAGCTTGCTTGGTCCTGAAATTAAAGCAGCTGATCCCATGAACAGAACTGTGGGCCTGGACAACCAAGGTCTAGTTGGTCTTCAGCGACAAATTATGAGAGAGCAAGATGACGATCTTCAGAAGCTGGAGGAGACTGTAATAAGTACAAAACATATTGCTCTGGCAGTCAACGAAGAACTGGACCTGCATTCGAGACTAATTGATGACTTGGACCAACATGTAGATGTTACCGACTCTCGATTACGGGTAATTCTCTCTTCATGA | 588 | 44.56 | MASSSDSWVKEYNEAVKLADDINGMISERTSVSVSGPEAQRYASTIRRKITILGTRLDSLLALLPKLPGKQPISDKEMNRRRDMVTNLRTKVTQMASQLNMSNFANRDSLLGPEIKAADPMNRTVGLDNQGLVGLQRQIMREQDDDLQKLEETVISTKHIALAVNEELDLHSRLIDDLDQHVDVTDSRLRVILSS | 195 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 4808229 | 4809673 | + | Bda025466.1 | Bda07g00381 | 9271 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda07g00381 | 195 | PANTHER | SYNTAXIN | 1 | 192 | IPR045242 | - | |
| Bda07g00381 | 195 | Gene3D | - | 139 | 194 | - | - | |
| Bda07g00381 | 195 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 137 | 195 | IPR000727 | - | |
| Bda07g00381 | 195 | PANTHER | TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED | 1 | 192 | - | - | |
| Bda07g00381 | 195 | SUPERFAMILY | t-snare proteins | 19 | 100 | IPR010989 | GO:0016020|GO:0016192 | |
| Bda07g00381 | 195 | SUPERFAMILY | SNARE fusion complex | 128 | 191 | - | - | |
| Bda07g00381 | 195 | CDD | SNARE_Qc | 140 | 190 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Bda05g00693 | Bda07g00381 | CCT | |
| Bda07g00381 | Bda09g00411 | BCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda05g00693 | Bda-Chr5:55214811 | Bda07g00381 | Bda-Chr7:4808229 | 2.34E-98 | dispersed | |
| Bda07g00381 | Bda-Chr7:4808229 | Bda09g00411 | Bda-Chr9:5111043 | 1.24E-128 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda07g00381 | K08503 | - | pvy:116145238 | 316.62 |