Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00387 GCAATGTGTAGCCCACGGTGTTTTCTTGTCGTACTTGCTCTGCTTCTGCATTTGTCTGTTGCTTTAGTTTCTGCTCAGCGATCTAATGGTACCAGTACCTGGCAGACTCTCAGCGGAAATGCTCCTTTAGTTATTGCACGTGGTGGATTCTCAGGCCTATTTCCTGATTCTAGTTTTTTTGCCTACACTCTGGCTGTAGCAGTCAGTGTACCTGATGTGGTCTTATGGTGTGATGTGCAATTAACAAAGGATGGGGCTGGAATTTGTCTTCCAGATTTGAAACTAGAAAATTCAACTGATATATCGAGCATTTATCCTAACGCAAAAAATCAGTACCTCGTGAATGGGGTTAGTACTACAGGATGGTTTTCTATCGATTTCACTCTCGATGGTCTTGCAAGTGTTGCTGATGAGAATAAATTTATTGACCCGTTGTATGTATTGCCAGCAAAACCGTTGGTTATTTCAAAGTTTGGAGCAAGTGGAGACTACCCTGCCTGTACTGACTTGGCATATAACAAAGCTATTTCAGATGGTGTGGAGATACTTGACTGTTCTGTTCAAATAGCTAAGGATGGGACGCCATTTTGCTTAAGTTCTATAAATCTTATAGATAGTACCACTATTGCACAAACCGCTTATAGCAACCTTTCAAAAACAATTCCAGAAATTAAATCTGGTAGTGGAATTTATGCTTTTGATCTTACATGGCCTCAGATTAGCGATTTGACTCCGGCGATATTAAATCCTTTTTCAAAGTACACTTTATATAGGAATCCCCTGTACAGAAATAGTGGGAAATTTCTAACGCTGTCTGACTTCTTGGGTCTGGCAAAGAACACAAGCTCCCTCTCGGGTGTCTTGCTCAGCATAGAGAATGCGGCTTACCTTGCGGAGCATCAGGATTTGAGTGTGGTTGATGCAGTCCTTGATGCGTTGAGTAAAGCAGGTTATGATAATCAAACATCTCAAATAGTTATGATCAGATCTACTAATAGTTCTGTTTTGAAAAAGATTGGGGGGAATAAGAAATATCACTATGTATATGAGGTTGATGAGACCATAAGTGGCGCTCTTGATTCCACTATTGTCGACATCAAGAGTTTTTCTGATGCCGTGGTTGTTGGAAAGTACTCTATTTTTACTCAAAATTTATTATTCCTCACTGGCTCCACAAACGTTGTCGAAAGACTGCATTCGTATAATCTATCCGTTTATGTACAAACTTTTAGCAATGAATTTGTGTCTCAACCATGGGATTTTTTCTCCGATCCAACGGTGGAGATCAACTCCTATTTTATGGGCACTGATATCGATGGGGTCATCACGGACTTCCCCATGACTGCCGCTCGTTACAAGAGAAATCGATGTTTAAATTTGGGCGATAAAACACCAATCTACATGACCCCGGCTAAGCCTGGTAGTCTGTATAAACTCATCACCGCGCCCTACTTGCCTCCAGCTGCATCTCCAAGTCCAGTCCTGAAAGTGTCAGACGTGAACGAGCCGCCATTGCCTTCGGTCGAAGAGGTAGCTCCGGCCCCGTCTTCCCCAGCCGGGGTGGGAGCCACCCCACCCGCCCCAAGTGGCCAGCCCAGGCTCTCGTCCTTCTTCTCCGTCTATGGCCTTGGACTTCTCCTAGCCGCCCTTGTTCCACTTTGA 1662 43.74 AMCSPRCFLVVLALLLHLSVALVSAQRSNGTSTWQTLSGNAPLVIARGGFSGLFPDSSFFAYTLAVAVSVPDVVLWCDVQLTKDGAGICLPDLKLENSTDISSIYPNAKNQYLVNGVSTTGWFSIDFTLDGLASVADENKFIDPLYVLPAKPLVISKFGASGDYPACTDLAYNKAISDGVEILDCSVQIAKDGTPFCLSSINLIDSTTIAQTAYSNLSKTIPEIKSGSGIYAFDLTWPQISDLTPAILNPFSKYTLYRNPLYRNSGKFLTLSDFLGLAKNTSSLSGVLLSIENAAYLAEHQDLSVVDAVLDALSKAGYDNQTSQIVMIRSTNSSVLKKIGGNKKYHYVYEVDETISGALDSTIVDIKSFSDAVVVGKYSIFTQNLLFLTGSTNVVERLHSYNLSVYVQTFSNEFVSQPWDFFSDPTVEINSYFMGTDIDGVITDFPMTAARYKRNRCLNLGDKTPIYMTPAKPGSLYKLITAPYLPPAASPSPVLKVSDVNEPPLPSVEEVAPAPSSPAGVGATPPAPSGQPRLSSFFSVYGLGLLLAALVPL 553
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4865272 4870165 + Bda025472.1 Bda07g00387 9277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00387 553 Pfam Glycerophosphoryl diester phosphodiesterase family 159 447 IPR030395 GO:0006629|GO:0008081
Bda07g00387 553 CDD GDPD_SHV3_repeat_2 152 452 - -
Bda07g00387 553 ProSiteProfiles GP-PDE domain profile. 152 453 IPR030395 GO:0006629|GO:0008081
Bda07g00387 553 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3 150 545 - -
Bda07g00387 553 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3 13 136 - -
Bda07g00387 553 MobiDBLite consensus disorder prediction 505 528 - -
Bda07g00387 553 ProSiteProfiles GP-PDE domain profile. 42 139 IPR030395 GO:0006629|GO:0008081
Bda07g00387 553 Gene3D Phosphatidylinositol (PI) phosphodiesterase 40 143 IPR017946 GO:0006629|GO:0008081
Bda07g00387 553 Gene3D Phosphatidylinositol (PI) phosphodiesterase 150 453 IPR017946 GO:0006629|GO:0008081
Bda07g00387 553 SUPERFAMILY PLC-like phosphodiesterases 40 134 IPR017946 GO:0006629|GO:0008081
Bda07g00387 553 SUPERFAMILY PLC-like phosphodiesterases 151 452 IPR017946 GO:0006629|GO:0008081
Bda07g00387 553 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 13 136 - -
Bda07g00387 553 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 150 545 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00387 Bda-Chr7:4865272 Bda09g00838 Bda-Chr9:19114647 1.59E-10 dispersed
Bda07g00387 Bda-Chr7:4865272 Bda07g00389 Bda-Chr7:4876368 7.36E-17 proximal
Bda12g00943 Bda-Chr12:40508837 Bda07g00387 Bda-Chr7:4865272 1.99E-12 wgd
Bda07g00387 Bda-Chr7:4865272 Bda09g00415 Bda-Chr9:5133560 2.08E-13 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00387 - - bhj:120086180 478.789