Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00389 ATGTGTAGCTCACGCTGTTTTGTTGTCCTACTTGCTCTTCTGCTTCTGCATTTATCTATTGCTTTAGTTTCTGGTCAACGATCTAATGATACCCGTGCCTGGCAGACTCTCAGCGGAAATGCTCCTTTAGTTATTGCACGCGGTGGATTCTCGGGACTATTTCCCGATTCTAGTTTATATGCATACAGTCTGGCTGTAGCAATCAGTGTACCTGATGTGGTCTTATGGTGTGATGTGCAATTAACAAAGGATGGGGCTGGAATTTGTCTTCCAGATTTGAAACTAGAAAATTCAACTGATATATCCATCGTTTATGCTAATGCAAAAAATCAGTACCTCGTGAATGGGGTTAATACTACAGGATGGTTTTCTGTCGATTTCACTCTCCATGACCTTGCAACTGTTACCGTTGATCAAGGGATTTACTCTCGAACTGATAAATTTGATGGCAATCCAATGCAAATACTCACTGTTAAAGATGTGGTTACTAGTATTAATGTTCCCGGATTATGGTTGAATATTCAGCACGATGCCTTCTTCACACAACACAATCTGAGCATGAGAAGTTATGTTCTCTCTGTATCTAAAACTGTCGTCCCAAATTACATATCATCTCCTGAGGTGAACTTTCTCAGAAGTATTGCGACGAGATTTAACTCAACCAAGACAAAGCTGGTGTTTCGATTTTTAAATTCAGATGATATAGAAGTGACTACTAACCAGACTTATGGATCCCTCTTAAGCAATCTTTCATTTATCAAGACATTTGCATCTGGAATTCTTGTTCCCAAATATTATATATGGCCTGCTGATGCATCTGGTTATTTACTATCTCATACATCTCTTGTTGCCGATGCCCATAATCACGGATTAGAAGTGTTTGCGTCAGAATTCTACAATGACATTCCACTCAGATATAATTACAGTTATGATCCAGTTACAGAGTACTTGTCTTACATCGATAATGGCGACTTTTCAGTTGATGGCGTGCTAACTGATTTCCCACTAAGTCCCTCTATGACCATAGGTAGTGTCAAAAATGAGAATAAATTTATTGACCCGTTGTATGTACTGCCAGCAAATCCGTTGGTTATTTCAAAGTTTGGAGCAAGTGGAGACTACCCTGCCTGTACTGACTTGGCATATAACAAAGCTATTTCAGATGGTGTGGAGATACTTGACTGTTCTGTTCAAATAGCTAAGGATGGGACGCCATTTTGCTTAAGTTCTATAAATCTCATAGATAGTACCACTATTGCACAAACCGCTTATAGCAACCTTTCAAAAACAATTCCAGAAATTAAATCTGGTAGTGGAATTTATGCTTTTGATCTTACATGGCCTCAGATTAGCGGTTTGACTCCGGCGATATTAAATCCTTTTTCGATGTACGCTTTATATAGGAATCCCCTGTACAGAAATAGTGGGAAATTTCTAACGCTGTCTGACTTCTTGGGTCTGGCAAAGAACACAAGCTCCCTCTCGGGTGTCTTGCTCAGCATAGAGAATGCGGCTTACCTTGCGGAGCATCAGGATTTGAGTGTGGTTGATGCCGTCCTTGATGCGTTGAGTGAAGCAGGTTATGATAATCAGACATCTCAAGTAGTTATGATCAGATCTACTAATAGTGCTGTTTTGAAAAAGATTGGGGGGAATAGGAAATATCACCATGTATATGAAGTTGATGAGACCATAAGTGGCGTTCTTGATTCCACTATTGTCGACATCAAGAGTTTTTCCGATGCCGTGGTTATCGGAAAGTACTCTGTTTTTCCTCAAAATTCATTATTCCTCACTGGCTCCACAAACGTCGTCCAAAAACTGCATTCCTATAATCTATCCGTTTATTTGCAAACTTTTAGCAACGAATTTGTGTCTCAACCATGGGAGTTTTTCTCCGATCTAACGGTGGAGATCAACTCCTATTTTATGGGTGCTGATATCGACGGTGTCATCACGGACTTCCCCATGACCGCCGCTCGTTACAAAAGAAATCGATGTTTAAATTTGGGCGATAAAACACCAGTCTACATGACCCCGGTTGAGCCTGGTAATCTGTATAAACTTATCACTGCCTCGTACTTGCCTCCAGCAGCACCTCCAAGTCCAGTCCTGAAAGTGTCAGACGTGGACGAGCCGCCATTGCCTTCGGTCGAAGCGGAAGACAAAGATGATGAACAGACTAAAGATGAAGTACAAATGTCCAACAAAAAAAGAGGAGATGGAGACAACAAACATGCTGAAGTTAAATGA 2253 40.75 MCSSRCFVVLLALLLLHLSIALVSGQRSNDTRAWQTLSGNAPLVIARGGFSGLFPDSSLYAYSLAVAISVPDVVLWCDVQLTKDGAGICLPDLKLENSTDISIVYANAKNQYLVNGVNTTGWFSVDFTLHDLATVTVDQGIYSRTDKFDGNPMQILTVKDVVTSINVPGLWLNIQHDAFFTQHNLSMRSYVLSVSKTVVPNYISSPEVNFLRSIATRFNSTKTKLVFRFLNSDDIEVTTNQTYGSLLSNLSFIKTFASGILVPKYYIWPADASGYLLSHTSLVADAHNHGLEVFASEFYNDIPLRYNYSYDPVTEYLSYIDNGDFSVDGVLTDFPLSPSMTIGSVKNENKFIDPLYVLPANPLVISKFGASGDYPACTDLAYNKAISDGVEILDCSVQIAKDGTPFCLSSINLIDSTTIAQTAYSNLSKTIPEIKSGSGIYAFDLTWPQISGLTPAILNPFSMYALYRNPLYRNSGKFLTLSDFLGLAKNTSSLSGVLLSIENAAYLAEHQDLSVVDAVLDALSEAGYDNQTSQVVMIRSTNSAVLKKIGGNRKYHHVYEVDETISGVLDSTIVDIKSFSDAVVIGKYSVFPQNSLFLTGSTNVVQKLHSYNLSVYLQTFSNEFVSQPWEFFSDLTVEINSYFMGADIDGVITDFPMTAARYKRNRCLNLGDKTPVYMTPVEPGNLYKLITASYLPPAAPPSPVLKVSDVDEPPLPSVEAEDKDDEQTKDEVQMSNKKRGDGDNKHAEVK 750
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4876368 4880331 + Bda025474.1 Bda07g00389 9279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00389 750 MobiDBLite consensus disorder prediction 701 750 - -
Bda07g00389 750 Gene3D Phosphatidylinositol (PI) phosphodiesterase 360 663 IPR017946 GO:0006629|GO:0008081
Bda07g00389 750 Gene3D Phosphatidylinositol (PI) phosphodiesterase 40 338 IPR017946 GO:0006629|GO:0008081
Bda07g00389 750 ProSiteProfiles GP-PDE domain profile. 362 663 IPR030395 GO:0006629|GO:0008081
Bda07g00389 750 Pfam Glycerophosphoryl diester phosphodiesterase family 369 657 IPR030395 GO:0006629|GO:0008081
Bda07g00389 750 Pfam Glycerophosphoryl diester phosphodiesterase family 49 336 IPR030395 GO:0006629|GO:0008081
Bda07g00389 750 MobiDBLite consensus disorder prediction 716 750 - -
Bda07g00389 750 ProSiteProfiles GP-PDE domain profile. 42 342 IPR030395 GO:0006629|GO:0008081
Bda07g00389 750 CDD GDPD_SHV3_repeat_1 42 339 - -
Bda07g00389 750 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 12 735 - -
Bda07g00389 750 SUPERFAMILY PLC-like phosphodiesterases 40 335 IPR017946 GO:0006629|GO:0008081
Bda07g00389 750 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3 12 735 - -
Bda07g00389 750 CDD GDPD_SHV3_repeat_2 362 662 - -
Bda07g00389 750 SUPERFAMILY PLC-like phosphodiesterases 361 662 IPR017946 GO:0006629|GO:0008081
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda07g00389 Bda12g00943 CCT
Bda07g00389 Bda09g00415 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00389 Bda-Chr7:4876368 Bda09g00415 Bda-Chr9:5133560 0 dispersed
Bda07g00387 Bda-Chr7:4865272 Bda07g00389 Bda-Chr7:4876368 7.36E-17 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00389 - - bhj:120086180 928.317