Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00410 ATGGCTGAATCAGAGGACGAGTCCGGAGGCGGACAGGCCACAGGGAGGAGCACGAACCGGGGTCTGTCGTTACGGGAGCAGGACCGGCTGTTGCCGATAGCGAACGTAGGAAGGATCATGAAGAAGGCGCTACCGGCGAACGGGAAGATCTCGAAGGAAGCAAAGGAGACGGTGCAAGAGTGTGTATCGGAGTTCATCAGCTTCATCACCGGAGAGGCGTCAGAAAAGTGTCAGAGAGAGAAGCGGAAGACGATAAACGGAGACGACTTGCTTTGGGCGATGACGACGTTAGGGTTCGAGGACTACGTGGAACCTCTGAAGATTTACTTGCAGCAGTTCAGAGAGATGGAAGGTGAGAAGTGCGTGGGGGCGCGTGGGAGAGAAGGCGGTGGGGAGGAAGGGAGTGGGTTCGTGGGTGGAACTGGAACAGGGACGGGGACGATGATGATGACGATGGGTCAGCATCAACCGGAGCATCGCCAAGGACACCTGTATGGATCATCAGGGGCACATCAGACGGCTGTGAGTAGCGCTGGCTACTGCGGTCGTGGGCCAGGCTACTCTAGCCGCGTGTCTAACAGTGGAAGGCCATCATAG 597 57.45 MAESEDESGGGQATGRSTNRGLSLREQDRLLPIANVGRIMKKALPANGKISKEAKETVQECVSEFISFITGEASEKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKIYLQQFREMEGEKCVGARGREGGGEEGSGFVGGTGTGTGTMMMTMGQHQPEHRQGHLYGSSGAHQTAVSSAGYCGRGPGYSSRVSNSGRPS 198
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5279521 5280117 + Bda025502.1 Bda07g00410 9300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00410 198 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 167 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bda07g00410 198 PRINTS CCAAT-binding transcription factor subunit A signature 77 95 - -
Bda07g00410 198 PRINTS CCAAT-binding transcription factor subunit A signature 58 76 - -
Bda07g00410 198 PRINTS CCAAT-binding transcription factor subunit A signature 96 114 - -
Bda07g00410 198 MobiDBLite consensus disorder prediction 1 26 - -
Bda07g00410 198 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2 1 167 - -
Bda07g00410 198 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 30 94 IPR003958 -
Bda07g00410 198 Gene3D Histone, subunit A 21 159 IPR009072 GO:0046982
Bda07g00410 198 MobiDBLite consensus disorder prediction 155 198 - -
Bda07g00410 198 SUPERFAMILY Histone-fold 27 120 IPR009072 GO:0046982
Bda07g00410 198 ProSitePatterns NF-YB/HAP3 subunit signature. 61 77 IPR003956 GO:0005634|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda07g00410 Bda12g00962 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00410 Bda-Chr7:5279521 Bda13g00590 Bda-Chr13:6927795 2.76E-66 dispersed
Bda12g00414 Bda-Chr12:5010035 Bda07g00410 Bda-Chr7:5279521 1.97E-34 transposed
Bda12g00962 Bda-Chr12:40824349 Bda07g00410 Bda-Chr7:5279521 2.18E-68 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16099 PF00808 CBFD_NFYB_HMF 1.70E-27 CL0012 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00410 K08065 - mnt:21401200 221.09