Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda07g00422 | ATGAATTCTCCTGCCACTGGAATCCAAATCCGGCATCCTTATTCCGTTTCTTCGTTCTGGGTTAGAATGGCAACCAGAATGTCTAGAGCTAGATGGTTCATTTTCTTAAGAAAAGTATTTCACTACCAGAACAGTTCGAGATCCGATCTGGGTTCTAATCCTTTAAATTCCAGCACCTGGATGATGATGGAGCTTATTGCTTTGGTAGCTCAGATAAGTTTGATAGTATTTACTCTGCATATATCTAAGAGCGAGAAGCCAGTTTGGCCTATGAGACTGTGGATTGCTGGTTATGGTATTGGTTGCTTCCTCAGTTTGCTCTTGCTCTTCGGTCGATATCGGCTTCTTTGTCTGAATCTTTCTGATGTGGAGCAGCAGAACAGAGAGAGTGAAGAATCAAGGACCTCGCATTTGAGAAACAAATGCCAGACATCTCTCGAGCTTTTCTTCGCAATATGGTTTGTCATCGGCAATGTTTGGATCTTCGACTCTCGCTTTGGTTCCTACGACCAAGCCACAAAGCTCCACTTCCTCTGCATATCACTCTTATCATGGAACGCCATTTGCTACTCCTTTCCGCTCCTCCTTTTCCTTCTGCTCTGCTGCTTTGTGCCGTTGGTCAGCCGCTATTTAGGCTACAACATGAACGTGGGTTCGGCCAATCGAGGAGCCTCCGACGAACAGCTATCTCAGCTGCCTAGCTGGAAATATAAACCGGTTAAAGTCGATTTAGAGCTCGAAACGGACTTGGAAAGCGATTCCGCCCTAGCAACCAAAGAAGATCCGGAATGCTGTATTTGTCTTGCAAAGTATACGGAGAGGGAGAAAGTGAGGGAGTTGCCTTGCTCACATATGTTTCATCTCAAGTGTGTTGATCAATGGCTGAGAATCATCCCCTGTTGCCCACTTTGCAAACAAGAGCTAGACAGTAGTACGTGA | 939 | 45.47 | MNSPATGIQIRHPYSVSSFWVRMATRMSRARWFIFLRKVFHYQNSSRSDLGSNPLNSSTWMMMELIALVAQISLIVFTLHISKSEKPVWPMRLWIAGYGIGCFLSLLLLFGRYRLLCLNLSDVEQQNRESEESRTSHLRNKCQTSLELFFAIWFVIGNVWIFDSRFGSYDQATKLHFLCISLLSWNAICYSFPLLLFLLLCCFVPLVSRYLGYNMNVGSANRGASDEQLSQLPSWKYKPVKVDLELETDLESDSALATKEDPECCICLAKYTEREKVRELPCSHMFHLKCVDQWLRIIPCCPLCKQELDSST | 312 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 5413694 | 5415324 | + | Bda025517.1 | Bda07g00422 | 9312 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda07g00422 | 312 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 14 | 309 | - | - | |
Bda07g00422 | 312 | SMART | ring_2 | 264 | 304 | IPR001841 | - | |
Bda07g00422 | 312 | Pfam | Ring finger domain | 263 | 305 | IPR001841 | - | |
Bda07g00422 | 312 | ProSiteProfiles | Zinc finger RING-type profile. | 264 | 305 | IPR001841 | - | |
Bda07g00422 | 312 | PANTHER | C3H4 TYPE ZINC FINGER PROTEIN | 14 | 309 | - | - | |
Bda07g00422 | 312 | SUPERFAMILY | RING/U-box | 263 | 309 | - | - | |
Bda07g00422 | 312 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 212 | 311 | IPR013083 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda07g00422 | Bda12g00980 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda07g00422 | Bda-Chr7:5413694 | Bda13g01283 | Bda-Chr13:35146003 | 2.99E-51 | dispersed | |
Bda12g00980 | Bda-Chr12:40942561 | Bda07g00422 | Bda-Chr7:5413694 | 6.48E-142 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda07g00422 | - | - | twl:119986263 | 438.343 |