Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00432 CAGATGAGCTCGGTTGATGATGAATCGACCAACGCCCTTGAGGAAGAGAGTCTGTTTTGGCCGGAGACTCGGCCCTGGAAGATCCCTAATGGCAATGCAGTTGAAAATGGACCATTTGCGGGTGATTCGCGAGCGATGGGTTATAAACGACTTAATATTGTTGTATATAAGAGCGTAAAGACTGTTGTTTTCTCAAATAAACTAAACTTCCTTATCCCTTTCGGCCCTCTTGCAATCCTTGTTGACAAATTCACTGGTCATCATGGCTGGGTGTTCTTCTTTAGCTTGTTAGGTATAGTGCCTCTGGCTGAGCGTCTGGGTTATTCTACAGAGCAGCTGGCCTTTTATACGGGCGCTACTGTTGGGGGGCTCTTAAATGCTACCTTCGGAAATGCAACAGAACTGATTATATCTATTTACGCTCTCAAGAGTGGAATGATTCGCGTTGTGCAGCTATCTTTACTAGGCTCTATTCTTTCCAATATGTTGTTAGTGCTTGGATGTGCATTCTTCTGTGGCGGACTCGTTCATCGTAAAAAGGAACAGACTTTTAGCAAGTCAACTGCGGTTGTCAACTCGGGATTGCTTTTAATGGCAGTCATGGGCCTTCTTTTTCCTGCAGTTCTGTATTACACCCACAGTGAGGCTCATTTTGGGACCTCTGAGTTGGCTCTCTCTAGATTTACCAGCTGCATTATGCTGGTCGCCTATGCTTCATATCTTTTCTTCCAGTTAAAGAGTCAAGAAAATCTGTATGCTTCTCCAGCTGAGGTGAATTGTGTGGATGTGGGAGACGATGATGAGGCTGCAGAGATCTCTAAATTGGAGTCGATTATCTGGCTTTTCATCATGACAGCTTGGATTTCTATTCTATCCGAGTATTTAGTTCATGCCATAGAGGGGGCATCATTATCATTCGGAATTCCAATCACATTTATTAGTGTTATTTTGCTGCCAATTGTGGGAAATGCAGCTGAGCATGCTAGTGCAATCTTGTTTGCTATGAAAGACAAGCTCGTAAGACTTCTAACCGAACATTTATTCTCTGCTGTTACTATGGACTGCAATAATTTCTGGGTATCTATGCAGGATATATCATTAGGAGTGGCAATTGGGTCGTCAACGCAGATTTCTATGTTTGGAATAATTTCACCCATGCATAACTGTATCCTGCAGGTTCCATTCTCAGTAGTGATTGGGTGGATGATGGGACAACCCATGGACTTAAACTTCAAACTTTTCGAGACGGCTACTCTTTTTATAACCGTCATAGTGGTTGCCTTTTTGCTACAGGAAGGAACCTCTAATTATTTCAAAGGACTTATGCTTATTCTATGCTATTTGATAGTAGCTGCAAGCTTTTTCGTGCATGTCGATCCTCTGTCGTCTTCGGCAGGTCAGCAATTGTCTAAAGCTTCTGTTATAGGACCTTCTTGA 1437 42.87 QMSSVDDESTNALEEESLFWPETRPWKIPNGNAVENGPFAGDSRAMGYKRLNIVVYKSVKTVVFSNKLNFLIPFGPLAILVDKFTGHHGWVFFFSLLGIVPLAERLGYSTEQLAFYTGATVGGLLNATFGNATELIISIYALKSGMIRVVQLSLLGSILSNMLLVLGCAFFCGGLVHRKKEQTFSKSTAVVNSGLLLMAVMGLLFPAVLYYTHSEAHFGTSELALSRFTSCIMLVAYASYLFFQLKSQENLYASPAEVNCVDVGDDDEAAEISKLESIIWLFIMTAWISILSEYLVHAIEGASLSFGIPITFISVILLPIVGNAAEHASAILFAMKDKLVRLLTEHLFSAVTMDCNNFWVSMQDISLGVAIGSSTQISMFGIISPMHNCILQVPFSVVIGWMMGQPMDLNFKLFETATLFITVIVVAFLLQEGTSNYFKGLMLILCYLIVAASFFVHVDPLSSSAGQQLSKASVIGPS 478
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5540861 5543590 + Bda025528.1 Bda07g00432 9322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00432 478 PANTHER VACUOLAR CATION/PROTON EXCHANGER 2 363 463 - -
Bda07g00432 478 PANTHER VACUOLAR CATION/PROTON EXCHANGER 2 5 340 - -
Bda07g00432 478 Pfam Sodium/calcium exchanger protein 278 452 IPR004837 GO:0016021|GO:0055085
Bda07g00432 478 Pfam Sodium/calcium exchanger protein 90 245 IPR004837 GO:0016021|GO:0055085
Bda07g00432 478 Gene3D - 117 456 IPR044880 -
Bda07g00432 478 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 363 463 IPR004713 GO:0006812|GO:0008324|GO:0016021
Bda07g00432 478 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 5 340 IPR004713 GO:0006812|GO:0008324|GO:0016021
Bda07g00432 478 TIGRFAM cax: calcium/proton exchanger 71 339 IPR004798 GO:0006816|GO:0015369
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00432 Bda-Chr7:5540861 Bda13g00559 Bda-Chr13:6542330 0 dispersed
Bda07g00432 Bda-Chr7:5540861 Bda06g00458 Bda-Chr6:6618326 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00432 K07300 - mnt:21406517 614.764