Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00455 ATGTATGTTGAGGAAATGAAGAGAGGGGAGGTGGAGAGTGGAGGAGAGGGAAATTTGAACGATGGAGATTGTAATTTTGTGAGCCAGAGCGTTGATGTTTCAGAGACGAAAAGAGTTTTGATTGGAGCTGGAGCTCGCGCTCTCTTCTACCCAACTCTGCTTTACAATGTTCTTAGGAATAAAATTCAGACTGAATTCCGGTGGTGGGATAGGGTTGATCAGTTTATACTGCTAGGTGCTGTTCCATTTCCCACTGACATACCCTGCTTGAAGGAGCTAGGTGTTCGGGGGGTCATCACACTGAATGAGCCGTATGAGACTTTGGTTCCAACAACCTTATATCAGGCTCATGGCATAGATCATCTGGTTATTCCTACCAGAGACTATTACTTTGCACCTTCATTAAGTAACATCATTCAGGCTCTGGATTTTATTCATGAAAACTCATTGCATGGTCGAAGTACCTATGTTCACTGTAAAGCGGGAAGAGGACGCAGCACTACTATAGTGATCTGCTACTTGGTGCATTATAAGCAGATGACACCAAATGACGCCTATAGTTACGTCAGATCAATTAGGCCAAGGGTGCTTTTAGCATCTTCCCAGTGGCAGGCTGTCCAGGAATTCTACTACCTTAATGTCAAGAAGACAGTCGTGTACAGTCGTCTGACAAATCTCCTAACGAAAGTGCCAATGTCATTAGTGGCAAAAGATGTTGCATTTGATGATGGGTCCGTTGTTTTAGTAACAAAATCTGATCTCAATGGTTATGAAGAGAGTCTGGAGTCAAGGTCGGAGCAAAGTGAGATATGGGCAGATATTGGTGTTGTTTATCGGGTTCGAATTGTTCGTCAGGCTGCTATGGCCAGGATATCTTGTCTCTGGCTCCGATGCTGCACTCACCACCAGAAAAGCAAACTCATTGACAACAGTGGCTGCACAATCAGTGCTGCTCATCTCGAAGGCATAAGTATGGATATCCATGTTTACTGA 993 44.21 MYVEEMKRGEVESGGEGNLNDGDCNFVSQSVDVSETKRVLIGAGARALFYPTLLYNVLRNKIQTEFRWWDRVDQFILLGAVPFPTDIPCLKELGVRGVITLNEPYETLVPTTLYQAHGIDHLVIPTRDYYFAPSLSNIIQALDFIHENSLHGRSTYVHCKAGRGRSTTIVICYLVHYKQMTPNDAYSYVRSIRPRVLLASSQWQAVQEFYYLNVKKTVVYSRLTNLLTKVPMSLVAKDVAFDDGSVVLVTKSDLNGYEESLESRSEQSEIWADIGVVYRVRIVRQAAMARISCLWLRCCTHHQKSKLIDNSGCTISAAHLEGISMDIHVY 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5872294 5875506 - Bda025556.1 Bda07g00455 9345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00455 330 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 136 204 IPR000387 GO:0016311|GO:0016791
Bda07g00455 330 SMART ptp_7 110 221 IPR003595 -
Bda07g00455 330 CDD PTPMT1 68 210 IPR044596 GO:0004721
Bda07g00455 330 Pfam Dual specificity phosphatase, catalytic domain 88 209 IPR000340 GO:0008138|GO:0016311
Bda07g00455 330 PANTHER - 1 330 - -
Bda07g00455 330 ProSitePatterns Tyrosine specific protein phosphatases active site. 157 167 IPR016130 GO:0016311|GO:0016791
Bda07g00455 330 Gene3D Protein tyrosine phosphatase superfamily 68 216 IPR029021 -
Bda07g00455 330 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 61 213 IPR029021 -
Bda07g00455 330 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE DSP8-RELATED 1 330 - -
Bda07g00455 330 SMART dsp_5 71 212 IPR020422 GO:0006470|GO:0008138
Bda07g00455 330 ProSiteProfiles Dual specificity protein phosphatase domain profile. 68 215 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02034 Bda-Chr1:56631957 Bda07g00455 Bda-Chr7:5872294 2.28E-99 dispersed
Bda07g00455 Bda-Chr7:5872294 Bda14g00209 Bda-Chr14:1448520 1.86E-06 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00455 - - zju:107430324 464.922