Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00489 ATGGCCAGAGAACTCTGCGAAGACAAATCAAGAAACATGGTTTCTTCGACAGGCTTTTGCTACTCGTCGGAGGTTTCTTCCAGCAACCCGAGTTTCCAAAATCATTTCGTAAGCCAGATCCAAGAGTTCGAGCCAAATCCAGCTGAGATCTTCAGTTTGACGACGAACATGGAGATGGTAGGGTTTTCAAAGAATCTCCATCATCAAAGCGGAAATAACACAGTTTTGTGGAAAGAAGTTTCTACAAAGCCTAACATGGGGTCGTCTTCTTCAAAAACGATGAACGAATCATCCAGTTTCTACGACCATGATTTCAACAAGCAAGATTTTACCAGCACCAGCGAGAATCTAATGGCTGGAGTTGGACCAGTAACGGCAGCTTGGCAAGAGAATAGATTCTTTCTCGATGATTCTTCCTTGAGGTGTGTTTTTAATTATGAAGCAAACGAAAGGCCTAGCCACGGCCTTTCTCTTTCTCTTTCTTCAGATAACCCTTCCGGTAACGCCTTACAGTCTTTTGAGCTGAGACAAACCGGAGAAGCTGTTGAGAAACTTGTTTCTTCTGTTTCTAGGAATAATGGGTTTTTCGGAAAAGCCGATAATATTCAACAGCAACAACATATTTTGCGAGATGGATTGGTGGGAAAAGTTGCAGATCTTCATCACCGTGGAGAGTTTCAGCTTGGAAACTCAAAGTTTTTGATTCCAACGCAGCAGCTTTTGAATGAATTCTGCAGCCTTGGAGAGAGAATTAATGATGCAGCGAAGAAGAAGAGTCATAAAACCACGCAGTGGGTAGAAGAAAATGCTACTACTTCTTTGAGGAAGCAGTCTCTTCACTCCCTTGATTTTATTGAATTGCAGAAGAGAAAAACGAGGCTATTTTCAATGATGGAAGAGCTCGAGCGTAGATACAGGCACTACTCCGACCAAATGAAAATGGTGGTGTCTTCATTCGAAGCGGTGGCTGGCGACGGAGCTGCGAATGTGTATTCCGCTTTAGCCTGCACGGCTATGTCGAGGCATTTCAGGTGTTTGAAAGATGGGATAGTGGTGCAGATTGAAGCAGTGAAGAAGGCGATGGGAGAGAAAGATCAGCAGGCGGCAGCGCCGGGGGCTTCGAAGGGGGAAACGCCGAGGCTACGCATTCTTGATCAGACGCTAAGACAGCTAAGGGCTTTCCAGCAAATGAGCTTGATGGAGAGCCACCCATGGCGGCCACAGCGTGGCCTTCCTGAACGTTCCGTTTCTGTTCTCCGAGCTTGGCTGTTTGAACACTTTCTTCACCCGTACCCAAGCGATGTTGATAAACACATCTTAGCCCGCCAAACTGGTCTCTCAAGAAGCCAGGTTTCCAACTGGTTCATCAATGCAAGGGTGAGGCTGTGGAAGCCAATGGTTGAGGATATGTATTTGGAAGAACAAAAGGAGCAAGAAAACGCATTGAACTCCTCAGCCGGAGGCATCGACATGGACAATAACAGAAGAACGAGGCCGGAAGATCGAAAACCGACGGCCGACCAACTACTCAAAATGAACTCCGAGTGCCTCTCATCCATCATTAACAACCCACCAAACTCAAAACCCGCCAAACTCATGCATAACCCCCACCACCACCAGCAAAATTTCTGCTCATTCGGGACAATGGAGCTCGACTTCTCTTCCTACAATCATCAATCTGCCGGAGCTGCACAAAGTTTTAACGGCGGCAGCGGAGGAGGTGTCTCATTGACACTAGGGCTACAACATCATGGTGGTAATGGACCGGTGAGCCTGGCATTCTCTCCCTCACCTCAAACTAATTCTCTCTTCTACCCTAGAGATTCCATTGAAGAATGTCAACCATCTATTCACTACTCCTTTTTAGATGCAGAAGCTCATAATTTACCTCACAGAAATTTAATGGGGGCTCAGCTGCTCCACGATTTGGCTGGATAA 1938 46.39 MARELCEDKSRNMVSSTGFCYSSEVSSSNPSFQNHFVSQIQEFEPNPAEIFSLTTNMEMVGFSKNLHHQSGNNTVLWKEVSTKPNMGSSSSKTMNESSSFYDHDFNKQDFTSTSENLMAGVGPVTAAWQENRFFLDDSSLRCVFNYEANERPSHGLSLSLSSDNPSGNALQSFELRQTGEAVEKLVSSVSRNNGFFGKADNIQQQQHILRDGLVGKVADLHHRGEFQLGNSKFLIPTQQLLNEFCSLGERINDAAKKKSHKTTQWVEENATTSLRKQSLHSLDFIELQKRKTRLFSMMEELERRYRHYSDQMKMVVSSFEAVAGDGAANVYSALACTAMSRHFRCLKDGIVVQIEAVKKAMGEKDQQAAAPGASKGETPRLRILDQTLRQLRAFQQMSLMESHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMVEDMYLEEQKEQENALNSSAGGIDMDNNRRTRPEDRKPTADQLLKMNSECLSSIINNPPNSKPAKLMHNPHHHQQNFCSFGTMELDFSSYNHQSAGAAQSFNGGSGGGVSLTLGLQHHGGNGPVSLAFSPSPQTNSLFYPRDSIEECQPSIHYSFLDAEAHNLPHRNLMGAQLLHDLAG 645
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6125759 6128577 + Bda025593.1 Bda07g00489 9379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00489 645 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 1 599 - -
Bda07g00489 645 SUPERFAMILY Homeodomain-like 406 471 IPR009057 -
Bda07g00489 645 MobiDBLite consensus disorder prediction 478 504 - -
Bda07g00489 645 CDD homeodomain 405 466 IPR001356 GO:0003677
Bda07g00489 645 ProSiteProfiles 'Homeobox' domain profile. 402 465 IPR001356 GO:0003677
Bda07g00489 645 PANTHER HOMEOBOX PROTEIN BEL1 HOMOLOG 1 599 - -
Bda07g00489 645 SMART HOX_1 405 469 IPR001356 GO:0003677
Bda07g00489 645 Pfam Associated with HOX 228 350 IPR006563 -
Bda07g00489 645 Pfam Homeobox KN domain 422 461 IPR008422 GO:0003677|GO:0006355
Bda07g00489 645 SMART prehox3 222 352 IPR006563 -
Bda07g00489 645 Coils Coil 284 304 - -
Bda07g00489 645 Gene3D - 408 470 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00660 Bda-Chr3:5622800 Bda07g00489 Bda-Chr7:6125759 5.95E-85 dispersed
Bda07g00489 Bda-Chr7:6125759 Bda14g01214 Bda-Chr14:12216414 1.48E-89 dispersed
Bda07g00489 Bda-Chr7:6125759 Bda09g00034 Bda-Chr9:536688 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16106 PF07526 POX 5.20E-41 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00489 - - tcc:18606572 821.617