Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00505 ATGGAAGGCGTAGTTTCAGTTTCTAAGAACAAGATACTAAAGCTTCACACTACCAGATCATGGGATTTTATGGGTTTAACCCAAGCAAAAGTTGGTGGCCCTCAAGAATCAGATGTTATTATTGGTCTTCTAGACACTGGAATATGGCCGGAATCGGAGAGCTTCAACGACGAAGGAATGGGACCTCCGCCGGCTAAATGGAAAGGGATTTGCCAAGGTGCCAATTTCACTTGCAACAACAAGCTCATCGGAGCAAGGTATTACAACAGTAACAATATAACAGGGCCCCGCGATATCCAGTCGCCACGGGATTCCATAGGTCATGGAACACATACGTCGTCCACAGCCGCCGGCCGAGAGGTGAAAGGAGCAAGCTACTTCGGCCTAGCGGAAGGAACTGCAAGGGGCGGAGTGCCCAATGCCCGAATCGCCATGTACAAAGTATGTTGGTCCACAGATTGTGGCAGCGCCGATATTCTCGCTGCCTTTGATGATGCTATATCGGACGGAGTCGACATTATATCTGTATCACTTGGCGGCTTCCCGGATTTGTATTTCAATGATGCAATTGCCGTCGGATCTTTCCACGCAATGAAGAATGGAATCTTAACATCGAATTCTGCCGGAAACGAAGGACCATTCCCCCTTTCCGTCGCCAATAATGCACCGTGGACTCTTACCGTCGCCGCCAGCACCATCGATCGTAAATTCGTTTCTCGTGTGGGTATGTCAATCAATAACTTTGATCTCCATGGGGCTTCGTTTCCATTAGTTTGGGGTGGAGATGCAGCAAATATCTCAGCTGGTATGACTTCAGATATATCCAAATTCTGCTTCGAAGACGTAATGAATTCTGATAAAGTGAAAGGAAAGATTGTTTTTTGCGAACGCATTGGTGATGGATCTGCCATTTTATTAACGAGTGGAGTGGGGGCAATCATGGCCGATACCAGATTTAGTGATTCGTCTTTCAGCTATCCATTACCAGCTACTTTGATTAGCGTAGAAGATGGCCAGCAAATTTTGGATTACATCAAAGCAACAGATTTTCCGATTGCGACTATTCTGTTTGGAGAGACGCCCGATGATGTAATGGCGCCATACGTTGTTTCTTTCTCGTCGAGAGGTCCGAATATCCTCAATCCAGACATTCTTAAGCCTGATATCACGGCTCCCGGAGTGGATATCTTGGCTGCTTGGTCTCCGGTGGCTGGTCCGTCAATCTATGATGGGGACACCAGAAGTGTCCTTTTTAATGTGATCTCTGGGACATCCATGTCTTGCCCCCATGTGAGCGGCGCCGCCGCTTATGTGAAGTCTGTTCATCCGGAGTGGTCTCCGGCCACCATTAAGTCTGCTCTAATGACTACAGGTGAAGTAATAAGTTTAACTGGTTCAGCATTTGTTATGGACAGAAACAAGCACGAAGACCTCGAATTTGCGTACGGGTCGGGTCATATCAACCCATTGAACGCAACAGACCCAGGTTTGGTATACGATGCAACGGAATCGGACTACGTCAGCTTCCTCTGCAAGGAGGGCTACAACACCACCACCGTGCAACTCATCACCGGAGACAATACCAGCGTCTGCGATGGCATCCTTCCCGGCAGAGGCTGGGATCTGAACTACCCGTCTTTCTCAGTCGCCATCGAAGATGGCCAACAGATCGCCGCCGTCTTCACCAGGGTGGTAACCAACGTCGGTGCTCCGAACTCAACCTATAAAGTGAGAATGGTCATGCCGTCTTTTATAAGCGTGACCGTTGAGCCACAGGAGCTGTCTTTCGGCGCCATTGGAGAGAAGCAAAGTTTCACAGTGAAAGTTTCGGGTGGGACGATTTCGCAGCAGCCCATTGCGTCCGGAGCTATCGTGTGGGAAGACGGTGTTCATGTGGTAAGAAGTCCTCTCGTGGTTTACACCATTATTCCTGGAGGATTCCTGAGCTTTGATGGCATTGCTAGAGATCAAACTCCGAATTTCAAAGGCTCTTTCATTCCAATCAGAGACCGATTTTAA 2019 48.49 MEGVVSVSKNKILKLHTTRSWDFMGLTQAKVGGPQESDVIIGLLDTGIWPESESFNDEGMGPPPAKWKGICQGANFTCNNKLIGARYYNSNNITGPRDIQSPRDSIGHGTHTSSTAAGREVKGASYFGLAEGTARGGVPNARIAMYKVCWSTDCGSADILAAFDDAISDGVDIISVSLGGFPDLYFNDAIAVGSFHAMKNGILTSNSAGNEGPFPLSVANNAPWTLTVAASTIDRKFVSRVGMSINNFDLHGASFPLVWGGDAANISAGMTSDISKFCFEDVMNSDKVKGKIVFCERIGDGSAILLTSGVGAIMADTRFSDSSFSYPLPATLISVEDGQQILDYIKATDFPIATILFGETPDDVMAPYVVSFSSRGPNILNPDILKPDITAPGVDILAAWSPVAGPSIYDGDTRSVLFNVISGTSMSCPHVSGAAAYVKSVHPEWSPATIKSALMTTGEVISLTGSAFVMDRNKHEDLEFAYGSGHINPLNATDPGLVYDATESDYVSFLCKEGYNTTTVQLITGDNTSVCDGILPGRGWDLNYPSFSVAIEDGQQIAAVFTRVVTNVGAPNSTYKVRMVMPSFISVTVEPQELSFGAIGEKQSFTVKVSGGTISQQPIASGAIVWEDGVHVVRSPLVVYTIIPGGFLSFDGIARDQTPNFKGSFIPIRDRF 672
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6451469 6454925 + Bda025612.1 Bda07g00505 9395

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00505 672 Pfam Fibronectin type-III domain 541 639 IPR041469 -
Bda07g00505 672 ProSiteProfiles Serine proteases, subtilase domain profile. 20 493 - -
Bda07g00505 672 SUPERFAMILY Subtilisin-like 15 497 IPR036852 GO:0004252|GO:0006508
Bda07g00505 672 CDD PA_subtilisin_like 241 355 - -
Bda07g00505 672 Gene3D Peptidase S8/S53 domain 38 506 IPR036852 GO:0004252|GO:0006508
Bda07g00505 672 ProSitePatterns Serine proteases, subtilase family, serine active site. 423 433 IPR023828 -
Bda07g00505 672 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 646 IPR045051 -
Bda07g00505 672 PANTHER CUCUMISIN-LIKE 2 646 - -
Bda07g00505 672 Pfam Subtilase family 37 484 IPR000209 GO:0006508|GO:0008236
Bda07g00505 672 Gene3D - 234 362 - -
Bda07g00505 672 Gene3D - 510 643 - -
Bda07g00505 672 CDD Peptidases_S8_3 13 457 IPR034197 -
Bda07g00505 672 PRINTS Subtilisin serine protease family (S8) signature 104 117 IPR015500 -
Bda07g00505 672 PRINTS Subtilisin serine protease family (S8) signature 422 438 IPR015500 -
Bda07g00505 672 PRINTS Subtilisin serine protease family (S8) signature 36 55 IPR015500 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00505 - - - cit:102628531 946.421
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00103 Bda-Chr6:1417921 Bda07g00505 Bda-Chr7:6451469 6.94E-145 dispersed
Bda07g00505 Bda-Chr7:6451469 Bda15g00241 Bda-Chr15:5060195 3.35E-71 dispersed
Bda07g00505 Bda-Chr7:6451469 Bda09g00063 Bda-Chr9:1251962 1.06E-19 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g417 . . . . . . Bma07g01628 . . . . . . . . . . . . . . . . . . . . . . . . . Cone12ag0332 . . . . . . Blo03g00376 Blo19g00304 Bda07g00505 . . Bpe11g00692 . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000076 4 11 10 2 4 9 2 9 8 9 6 8 11 11 13 15 8 7 10 7 10 3 9 11 14 11 3 7 13 26 271
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda07g00505 Bda_Chr07 FPKM 11.661908 12.239837 12.835243 13.41836 8.289255 7.924327 7.568241 16.662073 15.191351