Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00506 ATGCAGGAGCCAGGCTTGGGAATGATGGCATCCGCTGCCGGCGGTGGTGGCTCTAACTTGAGCGGCGAAGTATCGATCTCCGGCGACCACCATCACCGGCAAATCAAGGTTGAGATAGCCGCTCACCCTATATACGAGCAGCTTCTCGCCGCCCACGTGGCTTGTCTTCGTGTAGCTACCCCTATTGATCAGTTGCCGCTCATAGACGCGCAGCTGGCTCAATCGGAACATCTTTTACGCTCTTATGCGGCGCAGTCTCAACATCAGCAGGGCCATTCTCTCTCTCCCCATGAGAGCCAAGAGCTTGACAACTGCTTGGCACAGTATCTCTTAGTTTTGTGCTCCTTTAAAGAACAGCTTCAACAACATATTAGAGTTCATGCTGTAGAAGCCGTCATGGCCTGCCGCGAAATTGAAAACACTTTACAAGCTCTCACTGGAGCTAGTCTGGGAGAAGGCACAGGAGCAACAATGTCAGACGATGAAGAAGATATGCTGATGGATTTCTCGTTGGACCCATCTGGTGCAGATGGCCATGACATGATGGGTTTTGGCCCTCTTCTTCCTACTGAATCAGAAAGGTCTTTAATGGAGAGGGTTCGCCAAGAACTCAAGATTGAGTTGAAGCAGGGTTTCAAATCTAGAATTGAAGACGTCAGAGAAGAGATACTGAGAAAAAGAAGGGCCGGAAAATTACCTGGGGATACAACGACTGTGCTGAAAAATTGGTGGCAACAGCATTCTAAGTGGCCCTATCCAACAGAAGATGACAAAGCAAAGCTAGTGGAGGAGACAGGGCTGCAGCTGAAGCAAATAAACAACTGGTTCATCAACCAAAGAAAAAGGAACTGGCACAGCAATTCGCAGTCTGTAACATCCTTGAAGTCCAAGCGCAAGAGATAG 903 48.95 MQEPGLGMMASAAGGGGSNLSGEVSISGDHHHRQIKVEIAAHPIYEQLLAAHVACLRVATPIDQLPLIDAQLAQSEHLLRSYAAQSQHQQGHSLSPHESQELDNCLAQYLLVLCSFKEQLQQHIRVHAVEAVMACREIENTLQALTGASLGEGTGATMSDDEEDMLMDFSLDPSGADGHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRKR 300
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6463810 6466635 - Bda025613.1 Bda07g00506 9396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00506 300 SMART HOX_1 225 290 IPR001356 GO:0003677
Bda07g00506 300 Gene3D - 222 296 - -
Bda07g00506 300 ProSiteProfiles ELK domain profile. 203 223 IPR005539 GO:0003677
Bda07g00506 300 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 2 300 - -
Bda07g00506 300 SMART KNOX1_2 33 77 IPR005540 GO:0003677|GO:0005634
Bda07g00506 300 Pfam KNOX2 domain 96 146 IPR005541 GO:0003677|GO:0005634
Bda07g00506 300 SMART KNOX2_2 92 147 IPR005541 GO:0003677|GO:0005634
Bda07g00506 300 CDD homeodomain 226 287 IPR001356 GO:0003677
Bda07g00506 300 Pfam KNOX1 domain 35 76 IPR005540 GO:0003677|GO:0005634
Bda07g00506 300 SUPERFAMILY Homeodomain-like 225 290 IPR009057 -
Bda07g00506 300 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 7 2 300 - -
Bda07g00506 300 Pfam Homeobox KN domain 243 282 IPR008422 GO:0003677|GO:0006355
Bda07g00506 300 ProSiteProfiles 'Homeobox' domain profile. 223 286 IPR001356 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda07g00506 Bda09g00064 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00080 Bda-Chr3:823750 Bda07g00506 Bda-Chr7:6463810 2.08E-119 dispersed
Bda07g00506 Bda-Chr7:6463810 Bda09g01593 Bda-Chr9:47367375 8.66E-27 dispersed
Bda07g00506 Bda-Chr7:6463810 Bda09g00064 Bda-Chr9:1265540 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16109 PF03791 KNOX2 9.90E-16 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00506 - - zju:107405822 511.531