Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda07g00506 | ATGCAGGAGCCAGGCTTGGGAATGATGGCATCCGCTGCCGGCGGTGGTGGCTCTAACTTGAGCGGCGAAGTATCGATCTCCGGCGACCACCATCACCGGCAAATCAAGGTTGAGATAGCCGCTCACCCTATATACGAGCAGCTTCTCGCCGCCCACGTGGCTTGTCTTCGTGTAGCTACCCCTATTGATCAGTTGCCGCTCATAGACGCGCAGCTGGCTCAATCGGAACATCTTTTACGCTCTTATGCGGCGCAGTCTCAACATCAGCAGGGCCATTCTCTCTCTCCCCATGAGAGCCAAGAGCTTGACAACTGCTTGGCACAGTATCTCTTAGTTTTGTGCTCCTTTAAAGAACAGCTTCAACAACATATTAGAGTTCATGCTGTAGAAGCCGTCATGGCCTGCCGCGAAATTGAAAACACTTTACAAGCTCTCACTGGAGCTAGTCTGGGAGAAGGCACAGGAGCAACAATGTCAGACGATGAAGAAGATATGCTGATGGATTTCTCGTTGGACCCATCTGGTGCAGATGGCCATGACATGATGGGTTTTGGCCCTCTTCTTCCTACTGAATCAGAAAGGTCTTTAATGGAGAGGGTTCGCCAAGAACTCAAGATTGAGTTGAAGCAGGGTTTCAAATCTAGAATTGAAGACGTCAGAGAAGAGATACTGAGAAAAAGAAGGGCCGGAAAATTACCTGGGGATACAACGACTGTGCTGAAAAATTGGTGGCAACAGCATTCTAAGTGGCCCTATCCAACAGAAGATGACAAAGCAAAGCTAGTGGAGGAGACAGGGCTGCAGCTGAAGCAAATAAACAACTGGTTCATCAACCAAAGAAAAAGGAACTGGCACAGCAATTCGCAGTCTGTAACATCCTTGAAGTCCAAGCGCAAGAGATAG | 903 | 48.95 | MQEPGLGMMASAAGGGGSNLSGEVSISGDHHHRQIKVEIAAHPIYEQLLAAHVACLRVATPIDQLPLIDAQLAQSEHLLRSYAAQSQHQQGHSLSPHESQELDNCLAQYLLVLCSFKEQLQQHIRVHAVEAVMACREIENTLQALTGASLGEGTGATMSDDEEDMLMDFSLDPSGADGHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRKR | 300 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 6463810 | 6466635 | - | Bda025613.1 | Bda07g00506 | 9396 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda07g00506 | 300 | SMART | HOX_1 | 225 | 290 | IPR001356 | GO:0003677 | |
Bda07g00506 | 300 | Gene3D | - | 222 | 296 | - | - | |
Bda07g00506 | 300 | ProSiteProfiles | ELK domain profile. | 203 | 223 | IPR005539 | GO:0003677 | |
Bda07g00506 | 300 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 2 | 300 | - | - | |
Bda07g00506 | 300 | SMART | KNOX1_2 | 33 | 77 | IPR005540 | GO:0003677|GO:0005634 | |
Bda07g00506 | 300 | Pfam | KNOX2 domain | 96 | 146 | IPR005541 | GO:0003677|GO:0005634 | |
Bda07g00506 | 300 | SMART | KNOX2_2 | 92 | 147 | IPR005541 | GO:0003677|GO:0005634 | |
Bda07g00506 | 300 | CDD | homeodomain | 226 | 287 | IPR001356 | GO:0003677 | |
Bda07g00506 | 300 | Pfam | KNOX1 domain | 35 | 76 | IPR005540 | GO:0003677|GO:0005634 | |
Bda07g00506 | 300 | SUPERFAMILY | Homeodomain-like | 225 | 290 | IPR009057 | - | |
Bda07g00506 | 300 | PANTHER | HOMEOBOX PROTEIN KNOTTED-1-LIKE 7 | 2 | 300 | - | - | |
Bda07g00506 | 300 | Pfam | Homeobox KN domain | 243 | 282 | IPR008422 | GO:0003677|GO:0006355 | |
Bda07g00506 | 300 | ProSiteProfiles | 'Homeobox' domain profile. | 223 | 286 | IPR001356 | GO:0003677 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda07g00506 | Bda09g00064 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g00080 | Bda-Chr3:823750 | Bda07g00506 | Bda-Chr7:6463810 | 2.08E-119 | dispersed | |
Bda07g00506 | Bda-Chr7:6463810 | Bda09g01593 | Bda-Chr9:47367375 | 8.66E-27 | dispersed | |
Bda07g00506 | Bda-Chr7:6463810 | Bda09g00064 | Bda-Chr9:1265540 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16109 | PF03791 | KNOX2 | 9.90E-16 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda07g00506 | - | - | zju:107405822 | 511.531 |