Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00512 ATGGACGGCAATTCTATTCCATTTCCTTTCCACACCAGAGACTTCCATCAGGAGCAGCATCAATTTCAAAACTCGGAGGATGAACAAACTGTAAGCAGCGGACTGAACAACCGAACCCAGATGAAGCGAGATCGAGACGGAAACATAGAAGACTCCGGCGCGGGAGAAAGCAGCAAGGACCTTGGCGCAGGCGCTGGAGAAGGTGAGATGTCCAGAAGGCCACGAGGCCGACCAGCGGGATCAAAAAACAAACCGAAACCACCTATTATCATCACACGAGACAGCGCCAACGCCCTCCGGACCCACGTCATCGAGGTCACCGACGGATGTGACGTAGTAGAGAGCGTTGCCACCTTTGCCCGTCGTCGCCAGCGGGGGATCTGCATTATGAGTGGCACCGGTTCCGTCATGAACGTGGCGATTAGGCAACCATCATCCCCAGGTGCAATCGTCAACTTACACGGCCGATTTGAAATCCTATCCCTAGCAGGATCTTTTCTTCCTCCTCCTGCACCACCAGCGGCTACGAGCTTGGCGATTTACCTAGCCGGAGGTCAAGGACAAGTGATTGGGGGGAGCGTTGTTGGAACCCTTATCGCCTCTGGTCCAGTTGTAATAATGGCCGCTTCGTTTAGCAACGCCGCTTACGAGAGGCTTCCCCTGGACGAAGATGAACCACCGCTGCCGATGCCAGGCGCTGGTTTAGGGTCGCCTGGTGAAGTTAGCGATCAACAACAACAGCAGCAACAGCAACTTTTAGCAGATTCAAATGTTGCTAATTTATTCCATGGGTTGCCTCCAAATCTTCTCAACTCTATTCAGTTGCCGAATGAAGGGTATTGGGCTACCGGCCGACCACCTTACTGA 867 53.29 MDGNSIPFPFHTRDFHQEQHQFQNSEDEQTVSSGLNNRTQMKRDRDGNIEDSGAGESSKDLGAGAGEGEMSRRPRGRPAGSKNKPKPPIIITRDSANALRTHVIEVTDGCDVVESVATFARRRQRGICIMSGTGSVMNVAIRQPSSPGAIVNLHGRFEILSLAGSFLPPPAPPAATSLAIYLAGGQGQVIGGSVVGTLIASGPVVIMAASFSNAAYERLPLDEDEPPLPMPGAGLGSPGEVSDQQQQQQQQLLADSNVANLFHGLPPNLLNSIQLPNEGYWATGRPPY 288
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6538506 6539372 - Bda025622.1 Bda07g00512 9402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00512 288 CDD DUF296 100 211 IPR005175 -
Bda07g00512 288 Pfam Plants and Prokaryotes Conserved (PCC) domain 100 213 IPR005175 -
Bda07g00512 288 Gene3D - 99 226 - -
Bda07g00512 288 MobiDBLite consensus disorder prediction 39 53 - -
Bda07g00512 288 PIRSF ESCAROLA 10 288 IPR014476 GO:0003680
Bda07g00512 288 ProSiteProfiles PPC domain profile profile. 96 232 IPR005175 -
Bda07g00512 288 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 24-RELATED 4 288 - -
Bda07g00512 288 MobiDBLite consensus disorder prediction 1 90 - -
Bda07g00512 288 SUPERFAMILY AF0104/ALDC/Ptd012-like 96 230 - -
Bda07g00512 288 MobiDBLite consensus disorder prediction 221 250 - -
Bda07g00512 288 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 4 288 IPR014476 GO:0003680
Bda07g00512 288 MobiDBLite consensus disorder prediction 24 38 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00458 Bda-Chr3:3960199 Bda07g00512 Bda-Chr7:6538506 4.31E-37 dispersed
Bda07g00512 Bda-Chr7:6538506 Bda15g00342 Bda-Chr15:6271137 8.85E-77 dispersed
Bda11g00797 Bda-Chr11:7938525 Bda07g00512 Bda-Chr7:6538506 6.37E-46 dispersed
Bda13g01356 Bda-Chr13:35930228 Bda07g00512 Bda-Chr7:6538506 2.95E-52 dispersed
Bda14g00144 Bda-Chr14:991209 Bda07g00512 Bda-Chr7:6538506 2.67E-75 dispersed
Bda14g00285 Bda-Chr14:1937780 Bda07g00512 Bda-Chr7:6538506 3.57E-70 dispersed
Bda13g00424 Bda-Chr13:5179679 Bda07g00512 Bda-Chr7:6538506 6.51E-116 transposed
Bda07g00512 Bda-Chr7:6538506 Bda09g00069 Bda-Chr9:1361278 3.86E-160 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00512 - - vvi:100265031 395.971