Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00515 ATGGAAGAGAGGGAAGGTGGTGTAAGGAGTGGGGTTACAGTGGTAGGATCAGACGCTCCGTCTGACTACCATCTTGCTCCGAGGACGGAGAACTCAGTCCTGACCGGTGGATCAACAGCGACGCCGGCGCAGCCAACTTCTGCTTCAGCTCAGCCTGTGGCGGCACCACCGTCAGCGGGCTTGCCGTTGAAGAAAAAGAGAGGTAGGCCGAGGAAGTACGGACCAGATGGAACAGTCACTATGGCGCTTTCACCGAAGCCGATATCGTCATCGGCCCCGCCTCCGGTTATTGACTTCTCCGTTGAGAAGCGGGGAAAGATACGGCCGGCGAACTCAGTGAGCAAAACCAAATACCAAATGGAGAATTTGGGTGAATGGGTTGCTTGCTCCGTTGGTGCTAATTTCACACCCCATATTATTACTGTCAACTCTGGGGAGGATGTCATGATGAAAATTATATCATTTTCCCAACAAGGGCCTCGAGCAATCTGCATTATTTCTGCAAACGGCGTGATCTCTAGCGTCACACTTCGCCAACCTGATTCGTCAGGAGGAACATTAACTTACGAGGGTCGATTTGAAATACTGTCTTTGTCCGGCTCGTTCATGCCGAGTGATATTGGAGGAACTAGAAGTAGATCGGGTGGAATGAGCGTTTCGTTAGCTAGTCCTGACGGTCGAGTAGTAGGAGGAGGAGTAGCTGGTTTACTGGTAGCTGCAAGTCCTGTCCAAGTCGTAGTAGGGAGTTTTATCTCCGGAAATCAACACGAACAAAAACCCAAGAAGCAAAAATACAACACCACGTCGACTGCGCAAGTAACTGGAGAGATTCCAGTTTCAAGCACGGATCCGAAATCTAATGTCTCAGCATCAAATCTGCATGATGAAAACTGGTCATCTCTGCCATCTGAGTCGAGAAATAAGCCAACTGATATTAACGCGTCGTTGCCGGGAGGATAA 960 49.9 MEEREGGVRSGVTVVGSDAPSDYHLAPRTENSVLTGGSTATPAQPTSASAQPVAAPPSAGLPLKKKRGRPRKYGPDGTVTMALSPKPISSSAPPPVIDFSVEKRGKIRPANSVSKTKYQMENLGEWVACSVGANFTPHIITVNSGEDVMMKIISFSQQGPRAICIISANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDIGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFISGNQHEQKPKKQKYNTTSTAQVTGEIPVSSTDPKSNVSASNLHDENWSSLPSESRNKPTDINASLPGG 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6608187 6610708 + Bda025625.1 Bda07g00515 9405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00515 319 SUPERFAMILY AF0104/ALDC/Ptd012-like 134 257 - -
Bda07g00515 319 CDD DUF296 136 227 IPR005175 -
Bda07g00515 319 MobiDBLite consensus disorder prediction 1 95 - -
Bda07g00515 319 ProSiteProfiles PPC domain profile profile. 132 271 IPR005175 -
Bda07g00515 319 Pfam Plants and Prokaryotes Conserved (PCC) domain 137 250 IPR005175 -
Bda07g00515 319 Gene3D - 137 273 - -
Bda07g00515 319 MobiDBLite consensus disorder prediction 264 312 - -
Bda07g00515 319 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 10 317 IPR039605 GO:0003680
Bda07g00515 319 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 10 317 - -
Bda07g00515 319 MobiDBLite consensus disorder prediction 31 53 - -
Bda07g00515 319 MobiDBLite consensus disorder prediction 254 319 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00054 Bda07g00515 CCT
Bda06g00054 Bda07g00515 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00054 Bda-Chr6:580117 Bda07g00515 Bda-Chr7:6608187 3.64E-136 dispersed
Bda07g00515 Bda-Chr7:6608187 Bda15g00752 Bda-Chr15:11110255 1.42E-93 dispersed
Bda07g00515 Bda-Chr7:6608187 Bda11g00244 Bda-Chr11:2898066 1.45E-74 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00515 - - tcc:18606376 447.588