Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00557 ATGGCGACCAGAATGGGATCCATTTTCCACAAGTTTTTCTCCCTCTTAATCTTAATTCTCCATGTTGGTTGCTTTATCTTGACCAACCCCATTTCAAACCGCCATAGCCGCAAACCGAGCTCACCATCCGAATCAAGACAGCGCAAGTTCTTCTTCAAACCCCAGAAAGCTTTCTCCTCTTCGTTCTCTTTCCTCAAAACCATCTTCTCCTCTTCCCAGGTCTGCAAATCAGTAGACGAAACTCCATCCTCCCACCAATCTACAGTCTCCTCACGACTGCCTCTTGATTCCTCCGATATTCTGATTAAAAAATCAACCGGGTCTTCCCTGGATTCCGATATCTCGGCCGAGAATCCATTCTCACCGCTCAGAAACGATATCTTCCCCTGCACAGCTTGCGGCGAGATTTTTTCGAAACCTTACCCGCTCGAACAGCATCAGGCTATCAAACATGCTGTTTCGGAGCTTACAGATGGAGATACGGGCAAAAACATAGTCAAAATCATATTCAAAACGGGTTGGCGCAGTAATGAAAAGACCCCGAAAATCACTCGGATCCTTAAAGTTCACAACAGCCAAAAGATACTGTCGAGATTCGAAGAGTACAGAGAGACAGTAAAGATCAAGGCAGCAAGAAACGGCAGCGTTAGGAGGAGAGACGAGAGGTGTATCGCCGATGGAAATGAGCTTCTGAGGTTTCACTGTTCTACTTTCGTGTGCGACTTAGGAGTCAACGGTAGGTCCAGCCTCTGCGGCCATGAATTTTGCAACGTTTGCCAGATAATAAAATCAGGGTTTTCGCCCAAATTGGACGGAATTTCGACGATGTCAAGCAGCTGGAGGGCACACGTGTCGTTGCCGGAGGAGGTGGAGGAGGAGTTCAAGTACATGAACGTGAAGAGGGCGGTGATGGTGTGCCGGGTGGTAGCGGGTCGGGTTGGCTGTGAAGCAGAGGAAGCGGAGAAGGAGGATGGAGGGTTTGACTCAGTCGTTGGGAGGAAAGGAAGCGGGACCCACATAAGGTTCGACGAAGAGGAGTTGCTGGTGTTTAATCCAAGGGCTGTGCTGCCTTGCTTTGTGATCGTCTACAACGTCTGA 1098 49.0 MATRMGSIFHKFFSLLILILHVGCFILTNPISNRHSRKPSSPSESRQRKFFFKPQKAFSSSFSFLKTIFSSSQVCKSVDETPSSHQSTVSSRLPLDSSDILIKKSTGSSLDSDISAENPFSPLRNDIFPCTACGEIFSKPYPLEQHQAIKHAVSELTDGDTGKNIVKIIFKTGWRSNEKTPKITRILKVHNSQKILSRFEEYRETVKIKAARNGSVRRRDERCIADGNELLRFHCSTFVCDLGVNGRSSLCGHEFCNVCQIIKSGFSPKLDGISTMSSSWRAHVSLPEEVEEEFKYMNVKRAVMVCRVVAGRVGCEAEEAEKEDGGFDSVVGRKGSGTHIRFDEEELLVFNPRAVLPCFVIVYNV 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6918622 6927158 - Bda025669.1 Bda07g00557 9447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00557 365 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 4 364 - -
Bda07g00557 365 SUPERFAMILY ADP-ribosylation 153 364 - -
Bda07g00557 365 PANTHER NUCLEIC ACID BINDING PROTEIN 4 364 - -
Bda07g00557 365 ProSitePatterns Zinc finger C2H2 type domain signature. 130 151 IPR013087 -
Bda07g00557 365 Gene3D - 153 364 - -
Bda07g00557 365 ProSiteProfiles Zinc finger C2H2 type domain profile. 128 156 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00557 Bda-Chr7:6918622 Bda12g00882 Bda-Chr12:39556224 1.56E-50 dispersed
Bda07g00557 Bda-Chr7:6918622 Bda08g01222 Bda-Chr8:50076592 9.39E-67 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16111 None None None None Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00557 - - qlo:115989317 483.411