Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda07g00571 | ATGGCTCCTCCGGAAATGGATGACAGTCGAAAGCGTCAGAAACTAGAGGTTGTAGCTGATTCGTTTTCTAGAGACTGTAGATACGCAGTGGATAGTTCTTCTTTAGACGTAGACAAGGGCTTAGTAAAGCTTGAAAGTAGGAAACCAGAGATGGCGGAAAGCTCTCCGTCACCTCCGTCTTCGGACCTTTCCATATCGCTCCTCTGTCGATCTCCCGCGGCTCGAGTAGCTCCAGAAGTTCCGGGAGAGCAGCCGAGGTTCGGAGTGGTTTCGATTCGAGGAAGGCGAAGAGAAATGGAAGATGCGGTCTCCGTTCAACCATCGTTTTGCCGCATAGGCCATGAATCCAACCCTCACCTGCATTACTTCGCCGTTTACGACGGTCACGGTTGCTCTCATGTGGCGATCAAGTGCAAGGAGCGGTTGCACGAGCTGGTGAAGGAAGAGTTGGAAAGAGAGGTTGGACCATCTTCGTCGAATGATTGGAAGAGCGCCATGGAAAGAAGCTTTCGGCGCATGGACGAGGAAGTCAGTTGGTGTAGTGAAAGAATTGCAGGTTCAAACTGCAGGTGCGGGCTTCATCCCCCAGAGTGCTATACGGTTGGAACTACAGCCGTGGCTGCTATTTTAACCCCTGAGAAGATCATCGTCTCTAACTGCGGCGACTCGAGGGCTGTTCTCTGTCGTAGCGGCAAACCAGTCCCTCTCTCCTTTGATCACAAACCGGATCGACCAGATGAACTGAATCGGATCGAAGCGGCCGGCGGGCAAGTGATTTACTGGGGAGGCCCAAGAGTTCTCGGAGTTCTAGCCACATCAAGAGCCATTGGTAAACATGATTTTACACTTGCTTTTCTTTTAACGTCGTCTATGATCACCATTGAAGTGTTTATACAAATTTCACCAGGTGATAACTATCTGAAGCCCTACGTAAGCTGCGACCCGGAAGTGACGATCACTGATCGGTCGCCGGAGGATGATTGTCTGCTAATAGGAAGCGATGGACTTTGGGACGTCGTGTCCAACGAGACGGCATGCGAGGTGGCGCGCATGTGCCTCCAAGGCAAGTTTCGAAGGTTGCCGCCGCACTGTGCCCCAGCGCGCAGCGCAGTCGCTAGCCCAGAAATTCCTGACAAGGCATGCAGCGAGACGGCAACATTGCTGGGCAAGTTGGCACTAGGCCGGAAAAGTGCTGACAATGTGAGCTTGGTAATCGTAGACCTCAGGAGGACAGATCGAATGCAGTCAACTAATTTATAA | 1260 | 51.9 | MAPPEMDDSRKRQKLEVVADSFSRDCRYAVDSSSLDVDKGLVKLESRKPEMAESSPSPPSSDLSISLLCRSPAARVAPEVPGEQPRFGVVSIRGRRREMEDAVSVQPSFCRIGHESNPHLHYFAVYDGHGCSHVAIKCKERLHELVKEELEREVGPSSSNDWKSAMERSFRRMDEEVSWCSERIAGSNCRCGLHPPECYTVGTTAVAAILTPEKIIVSNCGDSRAVLCRSGKPVPLSFDHKPDRPDELNRIEAAGGQVIYWGGPRVLGVLATSRAIGKHDFTLAFLLTSSMITIEVFIQISPGDNYLKPYVSCDPEVTITDRSPEDDCLLIGSDGLWDVVSNETACEVARMCLQGKFRRLPPHCAPARSAVASPEIPDKACSETATLLGKLALGRKSADNVSLVIVDLRRTDRMQSTNL | 419 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 7048753 | 7050184 | - | Bda025687.1 | Bda07g00571 | 9461 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda07g00571 | 419 | Gene3D | - | 80 | 417 | IPR036457 | - | |
Bda07g00571 | 419 | CDD | PP2Cc | 86 | 408 | IPR001932 | - | |
Bda07g00571 | 419 | Pfam | Protein phosphatase 2C | 87 | 376 | IPR001932 | - | |
Bda07g00571 | 419 | ProSiteProfiles | PPM-type phosphatase domain profile. | 86 | 408 | IPR001932 | - | |
Bda07g00571 | 419 | SUPERFAMILY | PP2C-like | 85 | 409 | IPR036457 | - | |
Bda07g00571 | 419 | ProSitePatterns | PPM-type phosphatase domain signature. | 122 | 130 | IPR000222 | GO:0043169 | |
Bda07g00571 | 419 | PANTHER | PROTEIN PHOSPHATASE 2C 37 | 80 | 278 | - | - | |
Bda07g00571 | 419 | PANTHER | PROTEIN PHOSPHATASE 2C 37 | 303 | 411 | - | - | |
Bda07g00571 | 419 | SMART | PP2C_4 | 76 | 406 | IPR001932 | - | |
Bda07g00571 | 419 | PANTHER | ALPHABET, ISOFORM E-RELATED | 80 | 278 | - | - | |
Bda07g00571 | 419 | PANTHER | ALPHABET, ISOFORM E-RELATED | 303 | 411 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda02g00832 | Bda07g00571 | CCT | |
Bda02g00832 | Bda07g00571 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda07g00571 | Bda-Chr7:7048753 | Bda10g00866 | Bda-Chr10:43167648 | 6.07E-73 | dispersed | |
Bda05g00029 | Bda-Chr5:2081279 | Bda07g00571 | Bda-Chr7:7048753 | 1.21E-42 | transposed | |
Bda14g00146 | Bda-Chr14:997516 | Bda07g00571 | Bda-Chr7:7048753 | 1.07E-128 | wgd | |
Bda02g00832 | Bda-Chr2:48900353 | Bda07g00571 | Bda-Chr7:7048753 | 2.64E-132 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda07g00571 | K14497 | - | jre:109017805 | 467.618 |