Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00571 ATGGCTCCTCCGGAAATGGATGACAGTCGAAAGCGTCAGAAACTAGAGGTTGTAGCTGATTCGTTTTCTAGAGACTGTAGATACGCAGTGGATAGTTCTTCTTTAGACGTAGACAAGGGCTTAGTAAAGCTTGAAAGTAGGAAACCAGAGATGGCGGAAAGCTCTCCGTCACCTCCGTCTTCGGACCTTTCCATATCGCTCCTCTGTCGATCTCCCGCGGCTCGAGTAGCTCCAGAAGTTCCGGGAGAGCAGCCGAGGTTCGGAGTGGTTTCGATTCGAGGAAGGCGAAGAGAAATGGAAGATGCGGTCTCCGTTCAACCATCGTTTTGCCGCATAGGCCATGAATCCAACCCTCACCTGCATTACTTCGCCGTTTACGACGGTCACGGTTGCTCTCATGTGGCGATCAAGTGCAAGGAGCGGTTGCACGAGCTGGTGAAGGAAGAGTTGGAAAGAGAGGTTGGACCATCTTCGTCGAATGATTGGAAGAGCGCCATGGAAAGAAGCTTTCGGCGCATGGACGAGGAAGTCAGTTGGTGTAGTGAAAGAATTGCAGGTTCAAACTGCAGGTGCGGGCTTCATCCCCCAGAGTGCTATACGGTTGGAACTACAGCCGTGGCTGCTATTTTAACCCCTGAGAAGATCATCGTCTCTAACTGCGGCGACTCGAGGGCTGTTCTCTGTCGTAGCGGCAAACCAGTCCCTCTCTCCTTTGATCACAAACCGGATCGACCAGATGAACTGAATCGGATCGAAGCGGCCGGCGGGCAAGTGATTTACTGGGGAGGCCCAAGAGTTCTCGGAGTTCTAGCCACATCAAGAGCCATTGGTAAACATGATTTTACACTTGCTTTTCTTTTAACGTCGTCTATGATCACCATTGAAGTGTTTATACAAATTTCACCAGGTGATAACTATCTGAAGCCCTACGTAAGCTGCGACCCGGAAGTGACGATCACTGATCGGTCGCCGGAGGATGATTGTCTGCTAATAGGAAGCGATGGACTTTGGGACGTCGTGTCCAACGAGACGGCATGCGAGGTGGCGCGCATGTGCCTCCAAGGCAAGTTTCGAAGGTTGCCGCCGCACTGTGCCCCAGCGCGCAGCGCAGTCGCTAGCCCAGAAATTCCTGACAAGGCATGCAGCGAGACGGCAACATTGCTGGGCAAGTTGGCACTAGGCCGGAAAAGTGCTGACAATGTGAGCTTGGTAATCGTAGACCTCAGGAGGACAGATCGAATGCAGTCAACTAATTTATAA 1260 51.9 MAPPEMDDSRKRQKLEVVADSFSRDCRYAVDSSSLDVDKGLVKLESRKPEMAESSPSPPSSDLSISLLCRSPAARVAPEVPGEQPRFGVVSIRGRRREMEDAVSVQPSFCRIGHESNPHLHYFAVYDGHGCSHVAIKCKERLHELVKEELEREVGPSSSNDWKSAMERSFRRMDEEVSWCSERIAGSNCRCGLHPPECYTVGTTAVAAILTPEKIIVSNCGDSRAVLCRSGKPVPLSFDHKPDRPDELNRIEAAGGQVIYWGGPRVLGVLATSRAIGKHDFTLAFLLTSSMITIEVFIQISPGDNYLKPYVSCDPEVTITDRSPEDDCLLIGSDGLWDVVSNETACEVARMCLQGKFRRLPPHCAPARSAVASPEIPDKACSETATLLGKLALGRKSADNVSLVIVDLRRTDRMQSTNL 419
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7048753 7050184 - Bda025687.1 Bda07g00571 9461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00571 419 Gene3D - 80 417 IPR036457 -
Bda07g00571 419 CDD PP2Cc 86 408 IPR001932 -
Bda07g00571 419 Pfam Protein phosphatase 2C 87 376 IPR001932 -
Bda07g00571 419 ProSiteProfiles PPM-type phosphatase domain profile. 86 408 IPR001932 -
Bda07g00571 419 SUPERFAMILY PP2C-like 85 409 IPR036457 -
Bda07g00571 419 ProSitePatterns PPM-type phosphatase domain signature. 122 130 IPR000222 GO:0043169
Bda07g00571 419 PANTHER PROTEIN PHOSPHATASE 2C 37 80 278 - -
Bda07g00571 419 PANTHER PROTEIN PHOSPHATASE 2C 37 303 411 - -
Bda07g00571 419 SMART PP2C_4 76 406 IPR001932 -
Bda07g00571 419 PANTHER ALPHABET, ISOFORM E-RELATED 80 278 - -
Bda07g00571 419 PANTHER ALPHABET, ISOFORM E-RELATED 303 411 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda02g00832 Bda07g00571 CCT
Bda02g00832 Bda07g00571 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00571 Bda-Chr7:7048753 Bda10g00866 Bda-Chr10:43167648 6.07E-73 dispersed
Bda05g00029 Bda-Chr5:2081279 Bda07g00571 Bda-Chr7:7048753 1.21E-42 transposed
Bda14g00146 Bda-Chr14:997516 Bda07g00571 Bda-Chr7:7048753 1.07E-128 wgd
Bda02g00832 Bda-Chr2:48900353 Bda07g00571 Bda-Chr7:7048753 2.64E-132 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00571 K14497 - jre:109017805 467.618