Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda07g00579 | ATGCACCGGATGAAGAATATACCCGATGAAACAGTCGTCTCGACTAGCCCAAGAGACTCTGTCCTGAAATTGATCAAGAAAATTGACCCGGATTTGGTCATCCACGGCGTCGTAAACGGCACGTATAATGCCCCGTTTTTCCCAACTCGATTCAGAGAAGCGCTCTTCCACTTCTCGGCATTGTTTGACATGTTTGAGGCGACTGTGACTCGAGAAGATCCCCAGAGACTCATCTTCGAGCGGGAAATTTACGGCAGAGATGCTGTGAATGTGATAGCATGTGAGGGATTGGAGAGGTTTGAAAGGCCAGAGACTTACAAGCAGTGGCAGGCTAGAAATATTAGGGCTGGGTTTAAGCAGATTCCATTAAACCAGGAGATCTTGAAGGCTGTGAAGAAGATGGTGAAATCAGAATATCATGAAGATTTTGATGTTGATCAAGACGGCCATTGGATGTTGCAGAGCTGGAAAGGTAGAATTATTGATGCTCTTTCCTGTTGGATTCCTGCTTAA | 513 | 45.61 | MHRMKNIPDETVVSTSPRDSVLKLIKKIDPDLVIHGVVNGTYNAPFFPTRFREALFHFSALFDMFEATVTREDPQRLIFEREIYGRDAVNVIACEGLERFERPETYKQWQARNIRAGFKQIPLNQEILKAVKKMVKSEYHEDFDVDQDGHWMLQSWKGRIIDALSCWIPA | 170 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 7142356 | 7142868 | - | Bda025698.1 | Bda07g00579 | 9469 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda07g00579 | 170 | ProSiteProfiles | GRAS family profile. | 1 | 168 | IPR005202 | - | |
Bda07g00579 | 170 | Pfam | GRAS domain family | 1 | 167 | IPR005202 | - | |
Bda07g00579 | 170 | PANTHER | SCARECROW-LIKE PROTEIN 30 | 1 | 168 | - | - | |
Bda07g00579 | 170 | PANTHER | OSJNBA0084A10.13 PROTEIN-RELATED | 1 | 168 | IPR005202 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda07g00579 | Bda-Chr7:7142356 | Bda07g00332 | Bda-Chr7:4419946 | 5.70E-30 | dispersed | |
Bda14g00135 | Bda-Chr14:943576 | Bda07g00579 | Bda-Chr7:7142356 | 5.78E-71 | wgd | |
Bda07g00579 | Bda-Chr7:7142356 | Bda09g01510 | Bda-Chr9:46851450 | 2.22E-76 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16112 | PF03514 | GRAS | 3.20E-42 | CL0063 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda07g00579 | - | - | jre:109013011 | 276.559 |