Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00579 ATGCACCGGATGAAGAATATACCCGATGAAACAGTCGTCTCGACTAGCCCAAGAGACTCTGTCCTGAAATTGATCAAGAAAATTGACCCGGATTTGGTCATCCACGGCGTCGTAAACGGCACGTATAATGCCCCGTTTTTCCCAACTCGATTCAGAGAAGCGCTCTTCCACTTCTCGGCATTGTTTGACATGTTTGAGGCGACTGTGACTCGAGAAGATCCCCAGAGACTCATCTTCGAGCGGGAAATTTACGGCAGAGATGCTGTGAATGTGATAGCATGTGAGGGATTGGAGAGGTTTGAAAGGCCAGAGACTTACAAGCAGTGGCAGGCTAGAAATATTAGGGCTGGGTTTAAGCAGATTCCATTAAACCAGGAGATCTTGAAGGCTGTGAAGAAGATGGTGAAATCAGAATATCATGAAGATTTTGATGTTGATCAAGACGGCCATTGGATGTTGCAGAGCTGGAAAGGTAGAATTATTGATGCTCTTTCCTGTTGGATTCCTGCTTAA 513 45.61 MHRMKNIPDETVVSTSPRDSVLKLIKKIDPDLVIHGVVNGTYNAPFFPTRFREALFHFSALFDMFEATVTREDPQRLIFEREIYGRDAVNVIACEGLERFERPETYKQWQARNIRAGFKQIPLNQEILKAVKKMVKSEYHEDFDVDQDGHWMLQSWKGRIIDALSCWIPA 170
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7142356 7142868 - Bda025698.1 Bda07g00579 9469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00579 170 ProSiteProfiles GRAS family profile. 1 168 IPR005202 -
Bda07g00579 170 Pfam GRAS domain family 1 167 IPR005202 -
Bda07g00579 170 PANTHER SCARECROW-LIKE PROTEIN 30 1 168 - -
Bda07g00579 170 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 168 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00579 Bda-Chr7:7142356 Bda07g00332 Bda-Chr7:4419946 5.70E-30 dispersed
Bda14g00135 Bda-Chr14:943576 Bda07g00579 Bda-Chr7:7142356 5.78E-71 wgd
Bda07g00579 Bda-Chr7:7142356 Bda09g01510 Bda-Chr9:46851450 2.22E-76 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16112 PF03514 GRAS 3.20E-42 CL0063 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00579 - - jre:109013011 276.559