Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00587 ATGGCCATCACTGATTTATCTCCCCATTTTACCCCTATCACTCTCATCTATTTTCTTCTCCTCTCCTCTCCCAACCCTATTCCTGCCTTCAATGTAACTTCTCTTCTCTCCTCCTCCGCCGATCTTTCCCAATTCTGTTCTCTTCTCACCAACTCCATTGCCGCCGATCTGAGCTCCCGCTCGTCTCTAACCCTTCTCGCCGTTCCCAATCCTTATCTCTCCGCCTTCTCGGATCTCACCAGCCGCCTCTCTCCCACATCTCTTGCCGACGTCCTCCGCTACCATGTCCTCCTCGAATACTTTTCCTGGTCCGACCTCCGTCAGATCTCGCACTCCGGCCAGCTCGTCACCACTCTTTATCAGACTACTGGCCGAGCCACGTCCGACTTTGGCTCCGTCAACATCACTCGCGATCCTCTCACCGGCGTAATCTCGATTCGTTCTCCCAGTGCTTATTCTTCGGCGAACGCTACTGTTCTTCATCTGGTCAAGAATCTTCCGTACAATGTCAGCATCTACGCAGTTAATTCCCTCCTCGTTCCGTACGGATTCGATCTTATGGCGTCGGAGGCGCGGCCTCCGTTGGGGCTGAACATCACCAAGGCCTTAATCGACGGCAATAACTTCAACGTCGCCGCCTCAATGCTAACGGCTTCTGGCGTCGTCGAAGAGTTTGAAGCGGACGAAGGTGGAGCCGGAATCACGCTCTTCGTACCGACTGACGAAGCTTTCTCTAATCTTCCTGAGACAGTGAAATTACAGTCTCTTCCGGCGGAACAGAAAGCCGTTGTGTTGAAATTCCATGTACTTCACTCGTACTATCCATTAGGATCGCTCGAGTCGATTGTGAACCCGGTGCAGCCGACATTGGCGACGGAAGACATGGGAGCCGGTAGGTATACGCTGAACATATCGAAAGTAAATGGATCTGTGGGGATAAATACCGGAATCGTCCAAGCGACGGTCACTCAGACGGTGTTTGATCAGAACCCGGTCTCCATTTTCGGGGTGTCGAAGGTATTATTGCCTAAGGAAATATTTGGGGATAATCCGACCGTGACGACGAAGCCAAGCGAAGACATAAGTGGTGCTCCGCCGCCTGATTCCGCTTTCTCCCCGGATAGATCAGTGGCATCAAATGATCCGCCTTTGGGCCTGTCATCACCGGCTGGCGTCCGGGAAGAAATTGGATCGGGAGCTGCCGTCAATGGCCTGAGAAATTTCTTCCTTTGTTCTATACCCATTGGAGTGTACATAGTGGTATGA 1266 52.21 MAITDLSPHFTPITLIYFLLLSSPNPIPAFNVTSLLSSSADLSQFCSLLTNSIAADLSSRSSLTLLAVPNPYLSAFSDLTSRLSPTSLADVLRYHVLLEYFSWSDLRQISHSGQLVTTLYQTTGRATSDFGSVNITRDPLTGVISIRSPSAYSSANATVLHLVKNLPYNVSIYAVNSLLVPYGFDLMASEARPPLGLNITKALIDGNNFNVAASMLTASGVVEEFEADEGGAGITLFVPTDEAFSNLPETVKLQSLPAEQKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGRYTLNISKVNGSVGINTGIVQATVTQTVFDQNPVSIFGVSKVLLPKEIFGDNPTVTTKPSEDISGAPPPDSAFSPDRSVASNDPPLGLSSPAGVREEIGSGAAVNGLRNFFLCSIPIGVYIVV 421
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7204788 7206053 + Bda025708.1 Bda07g00587 9477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00587 421 SMART fasc_3 64 182 IPR000782 -
Bda07g00587 421 SMART fasc_3 235 344 IPR000782 -
Bda07g00587 421 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 9 411 IPR033254 -
Bda07g00587 421 SUPERFAMILY FAS1 domain 22 181 IPR036378 -
Bda07g00587 421 Gene3D FAS1 domain 22 181 IPR036378 -
Bda07g00587 421 Gene3D FAS1 domain 197 344 IPR036378 -
Bda07g00587 421 ProSiteProfiles FAS1/BIgH3 domain profile. 196 341 IPR000782 -
Bda07g00587 421 Pfam Fasciclin domain 208 343 IPR000782 -
Bda07g00587 421 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4 9 411 - -
Bda07g00587 421 ProSiteProfiles FAS1/BIgH3 domain profile. 29 167 IPR000782 -
Bda07g00587 421 MobiDBLite consensus disorder prediction 351 390 - -
Bda07g00587 421 SUPERFAMILY FAS1 domain 203 344 IPR036378 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda07g00587 Bda09g01506 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00587 Bda-Chr7:7204788 Bda15g00992 Bda-Chr15:18354830 1.02E-39 dispersed
Bda07g00587 Bda-Chr7:7204788 Bda09g01506 Bda-Chr9:46826262 7.60E-134 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00587 - - cpep:111787179 582.408