Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda07g00609 | ATGAACCGAAGAGAGGAAATGAGGAATAATTTTTTCAAATCTTCGTCACCTTCGAGTTCGTCGTCGACAATCACACCACCGCGCTCTCCTGTCCACATTGTTTCTGAATCGGTAATGGAAGAGAATGTGCATGTTGCGGAATCAGTAATCACGAAATGGGATTCTGATTCTTCTTCATACGCCGAAATCACATCGCTTTTCCGTGATAATCGATATGAAGCAAAGGAGTTCGTCAAATCTGTGAAAGATTTGCAGGCAGCTATGCATTTTTTTGCTTCTACGAATTCGAGCTCTGTGAAGCTTGTTCGCGCTCAGACTTTGATGCAAATTGCGATGAAGAGGCTTCAGAAAGAATTTTACCACATTTTATCTGCAAATAAGAAGAGTTTGGATCCTGAATCAGTTTCTACCTGTTCGTCTATGTCATCGGCTAGATTTAGCTCGTCTGATTTCGAGGAGGAAACTGACGAAGATTTCCGTTTCGCTAATGAATCTGTTTCTGAAGCTGAACGTGTTTCCAGGACTGCTGTGGCTGATTTGAAAGCTATTGCTGACTGTATGATCTCTTCTGGTTACGCTAGGGAGTGCGTACAAATTTATAAAGTCATCAGAAAATCAATAATCGATGAGGGACTTCATCGTCTCGGGATTGAGAAATTCAGTTCTTCAGAGGTCCACAAAATGGACTGGGAGCATTTGGAGAAGAAGATCAAGAATTGGCTGAATGCGGTGAAAATGGCTATGAAAACGTTGTTCGACGGAGAGCGGATTCTCTGCGATCGCGTTTTTTCTGCTTCGCAATCCATCATCGAATCATGCTTTACCGAAATTTCAAAAGAGGGAGCTATGAATCTGTTTGCCTTCCCGGAATTAGTAACGAAGCACAAGAAAACTCCCGAGAAAATTTTCGTCTATTTGGACATCTACGGAGCCATCACCGATATTTGGCCTGAAATCGAATCCATCTTCTCCTTCGAATCGACTTCAACTGTCCGGTCACTCGCCCTTAATTCTCTAACCAAGCTTGCAGAGGCAGTGCGTAGCATGATCGCGGACTTTGAATCGGCCATCCAAAAAGACTCCTCCAAATCGCCTGTTCCAGGCGGAGGAATCCACCCGCTGACTCGCTACGTAATGAATTACGTCTCATTCCTCACCGATTACAGCGAAATTCTCACCTATATATTCGCTGACTGGCCTTTAGTTTTGAACGCTCCATTACCGGAAGGTTTTAACTCCGACGACAATCCCATTACAATACGCCTCGCTTGGCTCATCCTCGTTCTCGTATGTAAACTCGACGGTAAGGCGGAGCTCTACCACGATGTTGCTCTCTCGTACATATTCTTGGCCAATAACCTCCAATACGTCGTCGTGAAAGTCAATTCGTCAAATCTCAAATTCCTTCTCGGCGACGATTGGATTACCAATCATCAGCAGAAAATCAAACAGTACAGACTGACCTACGAGCGGATAGGATGGAGCAAAGTATTTTCGACGTTGCCGGCCGATCCAACGGCGAATATTTCGCCTGCAGAAGCAAGGGAATGCTTCAGGAAGTTCGGTGTAGCTTTCGAAGAAACGTACCGGAAACAGACGTCGTGGATCGTACCTGACTCAAAACTCCGAGACGAGATAAAGTCGTCTCTGGGGAAAAAACTCGGATCTTTGTACGGTGAATTTTATGAAAATCACCGGGACCGATTTGCGAGTGGATCAATCTCCGTCATTAAACTTACCCCTTCCGATATCGAAAATTACTTGTCTGATTCGTTCTACGGTCCCAAAGGTGGTAGTGGCAGTGTATCATCGTCTTCCTCCTCCTCTTCCTCTCATTATCGCGGTGCAGAAGGTCGTCATGATATTTAG | 1869 | 44.84 | MNRREEMRNNFFKSSSPSSSSSTITPPRSPVHIVSESVMEENVHVAESVITKWDSDSSSYAEITSLFRDNRYEAKEFVKSVKDLQAAMHFFASTNSSSVKLVRAQTLMQIAMKRLQKEFYHILSANKKSLDPESVSTCSSMSSARFSSSDFEEETDEDFRFANESVSEAERVSRTAVADLKAIADCMISSGYARECVQIYKVIRKSIIDEGLHRLGIEKFSSSEVHKMDWEHLEKKIKNWLNAVKMAMKTLFDGERILCDRVFSASQSIIESCFTEISKEGAMNLFAFPELVTKHKKTPEKIFVYLDIYGAITDIWPEIESIFSFESTSTVRSLALNSLTKLAEAVRSMIADFESAIQKDSSKSPVPGGGIHPLTRYVMNYVSFLTDYSEILTYIFADWPLVLNAPLPEGFNSDDNPITIRLAWLILVLVCKLDGKAELYHDVALSYIFLANNLQYVVVKVNSSNLKFLLGDDWITNHQQKIKQYRLTYERIGWSKVFSTLPADPTANISPAEARECFRKFGVAFEETYRKQTSWIVPDSKLRDEIKSSLGKKLGSLYGEFYENHRDRFASGSISVIKLTPSDIENYLSDSFYGPKGGSGSVSSSSSSSSSHYRGAEGRHDI | 622 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 7447166 | 7449034 | + | Bda025734.1 | Bda07g00609 | 9499 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda07g00609 | 622 | MobiDBLite | consensus disorder prediction | 11 | 29 | - | - | |
| Bda07g00609 | 622 | Pfam | Exo70 exocyst complex subunit | 238 | 590 | IPR046364 | GO:0000145|GO:0005546|GO:0006887 | |
| Bda07g00609 | 622 | SUPERFAMILY | Cullin repeat-like | 56 | 590 | IPR016159 | - | |
| Bda07g00609 | 622 | PANTHER | EXOCYST SUBUNIT EXO70 FAMILY PROTEIN | 25 | 604 | - | - | |
| Bda07g00609 | 622 | MobiDBLite | consensus disorder prediction | 595 | 622 | - | - | |
| Bda07g00609 | 622 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 25 | 604 | IPR004140 | GO:0000145|GO:0006887 | |
| Bda07g00609 | 622 | MobiDBLite | consensus disorder prediction | 596 | 613 | - | - | |
| Bda07g00609 | 622 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
| Bda07g00609 | 622 | Gene3D | Exocyst complex component Exo70 | 48 | 598 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Bda07g00609 | Bda09g01492 | CCT | |
| Bda02g00802 | Bda07g00609 | CCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda03g00768 | Bda-Chr3:6435698 | Bda07g00609 | Bda-Chr7:7447166 | 6.59E-173 | dispersed | |
| Bda05g00983 | Bda-Chr5:58284246 | Bda07g00609 | Bda-Chr7:7447166 | 0 | dispersed | |
| Bda07g00609 | Bda-Chr7:7447166 | Bda15g00194 | Bda-Chr15:4466763 | 0 | dispersed | |
| Bda01g00259 | Bda-Chr1:27073647 | Bda07g00609 | Bda-Chr7:7447166 | 8.41E-158 | wgd | |
| Bda14g00320 | Bda-Chr14:2159630 | Bda07g00609 | Bda-Chr7:7447166 | 0 | wgd | |
| Bda15g00210 | Bda-Chr15:4848451 | Bda07g00609 | Bda-Chr7:7447166 | 1.35E-06 | wgd | |
| Bda02g00802 | Bda-Chr2:48712237 | Bda07g00609 | Bda-Chr7:7447166 | 0 | wgd | |
| Bda07g00609 | Bda-Chr7:7447166 | Bda09g01492 | Bda-Chr9:46739027 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda07g00609 | K07195 | - | jre:109018463 | 725.702 |