Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00616 ATGGCGGATATGACTCAGAATAGCATAGCTGATTTTCCTGCTGTCCCGACTCACGGAGGTCAATTCGTACAGCACAATATATTCGGAAATTTCTTTGAGATCACTGCAAAGTATCGTCCTCCGATCATGCCGATAGGTCGTGGAGCATACGGAATCGTCTGCTCGGTTTTAAACGCAGAAACGAACGAGATGGTTGCGATAAAGAAAATAGCCAACGCGTTTGACAATCACATGGATGCAAAGCGAACGCTCAGAGAGATTAAGCTGCTTCGGCATTTGGATCACGAAAACATCATAGGTATTAGAGACGTTATTCCTCCACCTTTACGAAGAGAATTTACAGATGTCTACGTTGCCACCGAGCTAATGGATACTGACCTTCACCAAATAATACGCTCCAATCAAGGTTTATCTGAAGAGCACTGTCAGTATTTCCTTTACCAGATTCTCAGAGGATTGAAGTACATCCACTCGGCCAACATTATTCATAGAGACTTGAAACCGAGCAACTTACTGCTCAATGCAAATTGTGACCTTAAAATATGTGATTTTGGTCTTGCTCGACCAACCTCCGAGAATGAATTCATGACAGAATATGTCGTCACAAGATGGTACAGAGCACCCGAATTGCTGTTAAATTCCTCTGACTATACTGCTTCCATCGATGTTTGGTCAGTGGGATGCATTTTTTTGGAGCTTATGAATAGAAAACCATTGTTTCCAGGCAGGGATCACGTGCATCAGATGCGTTTGTTAACAGAGCTGCTTGGAACACCTACTGAGTCTGATCTTGGGTTTGTTAGAAATGAGGACGCGAGACGATATATTCGACAACTTCCACAACACCCTCGTCAACCACTCACGATGGTGTTTCCTCATGTTCATCCCTTAGCAATTGATCTTATTGACAAGATGTTGACTTTTGATCCCACAAGGAGAATAACTGTTGAAGAAGCCTTAGCCCATCCATATCTTGAGAGATTACATGACATAGCTGATGAGCCTGTCTGCCCTGAGCCTTTCTCCTTCGACTTTGAGCAACAACCTTTAGGAGAAGAGCAAATGAAGGATATGATTTACATGGAGGCCTTATCATTCAATCCTCACCTTGCATAA 1116 43.01 MADMTQNSIADFPAVPTHGGQFVQHNIFGNFFEITAKYRPPIMPIGRGAYGIVCSVLNAETNEMVAIKKIANAFDNHMDAKRTLREIKLLRHLDHENIIGIRDVIPPPLRREFTDVYVATELMDTDLHQIIRSNQGLSEEHCQYFLYQILRGLKYIHSANIIHRDLKPSNLLLNANCDLKICDFGLARPTSENEFMTEYVVTRWYRAPELLLNSSDYTASIDVWSVGCIFLELMNRKPLFPGRDHVHQMRLLTELLGTPTESDLGFVRNEDARRYIRQLPQHPRQPLTMVFPHVHPLAIDLIDKMLTFDPTRRITVEEALAHPYLERLHDIADEPVCPEPFSFDFEQQPLGEEQMKDMIYMEALSFNPHLA 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7528787 7531486 + Bda025742.1 Bda07g00616 9506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00616 371 Gene3D Transferase(Phosphotransferase) domain 1 123 352 - -
Bda07g00616 371 ProSiteProfiles Protein kinase domain profile. 39 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g00616 371 ProSitePatterns MAP kinase signature. 74 177 IPR003527 GO:0004707|GO:0005524|GO:0006468
Bda07g00616 371 Pfam Protein kinase domain 44 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g00616 371 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 16 369 - -
Bda07g00616 371 Gene3D Phosphorylase Kinase; domain 1 22 362 - -
Bda07g00616 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Bda07g00616 371 SMART serkin_6 39 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g00616 371 ProSitePatterns Protein kinases ATP-binding region signature. 45 69 IPR017441 GO:0005524
Bda07g00616 371 SUPERFAMILY Protein kinase-like (PK-like) 44 332 IPR011009 -
Bda07g00616 371 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 16 369 - -
Bda07g00616 371 CDD STKc_TEY_MAPK 32 368 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00616 Bda-Chr7:7528787 Bda11g00256 Bda-Chr11:2978852 0 dispersed
Bda07g01675 Bda-Chr7:31090988 Bda07g00616 Bda-Chr7:7528787 3.68E-51 dispersed
Bda07g00616 Bda-Chr7:7528787 Bda10g00939 Bda-Chr10:43740442 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69706 PF00069 Pkinase 6.10E-74 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00616 K20536 - vvi:100263976 699.508