Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00619 ATGGAGACCAGTGAAACAAATACTTCTACTTCATCAAACCCTGCAACTTCTTCATCGCCGGTATCATCGTCTTCTCCTTCACCTCCGGCGACTACTCCGGCCACGACCATACATGTAATTCTCAGTCCTTGCGCGGCGTGCAAGATTTTACGGCGAAGATGCGCTGACAAATGTGTACTGGCGCCGTACTTCCCTCCCACTGAGCCCGCGAAGTTCACCATAGCTCATCGAGTTTTTGGCGCCAGCAATATCATCAAGTTTCTGCAGGCATATCAAAGGGCAGACGCAGTTAGCAGCATGGTGTATGAAGCAAGTGCGAGAATAAGAGATCCAGTTTACGGATGTGCAGGCGCCATTTGCCAACTTCAGAAACAAGTGAACGAGCTTCAAGCCGAATTAGCAAAAGCACAAGCCGAGCTCCTCAACATGCAGTGTCAACAGACCAATCTCGTCTCTGTCATTTGCAGAGAGTTTTCTCAGTCATCTCAGCCATGGCCGAATGAGCATCAATCTCTTGATAATTTCATTCTAAACGACCCTCATTCGTACCTGACAAACAATCCAAGCTTATTTGAAGACGGGTCTTTGTGGGAGCCTCTGTGGACTTGA 609 48.28 METSETNTSTSSNPATSSSPVSSSSPSPPATTPATTIHVILSPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQAYQRADAVSSMVYEASARIRDPVYGCAGAICQLQKQVNELQAELAKAQAELLNMQCQQTNLVSVICREFSQSSQPWPNEHQSLDNFILNDPHSYLTNNPSLFEDGSLWEPLWT 202
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7551742 7552812 + Bda025745.1 Bda07g00619 9509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00619 202 MobiDBLite consensus disorder prediction 1 32 - -
Bda07g00619 202 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 28 201 - -
Bda07g00619 202 Coils Coil 119 146 - -
Bda07g00619 202 Pfam Lateral organ boundaries (LOB) domain 43 137 IPR004883 -
Bda07g00619 202 ProSiteProfiles LOB domain profile. 42 140 IPR004883 -
Bda07g00619 202 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 28 201 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda07g00619 Bda09g00178 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00619 Bda-Chr7:7551742 Bda14g00236 Bda-Chr14:1600223 2.44E-48 dispersed
Bda14g00338 Bda-Chr14:2427324 Bda07g00619 Bda-Chr7:7551742 3.53E-69 wgd
Bda07g00619 Bda-Chr7:7551742 Bda09g00178 Bda-Chr9:2626266 4.16E-114 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16116 PF03195 LOB 1.80E-37 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00619 - - minc:123208287 246.514